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  5. Solyc01g005300.4.1

Solyc01g005300.4.1


Description : component ADO of SCF E3 ubiquitin ligase complex. photoreceptor (ADO)


Gene families : OG0001227 (Archaeplastida) Phylogenetic Tree(s): OG0001227_tree ,
OG_05_0002873 (LandPlants) Phylogenetic Tree(s): OG_05_0002873_tree ,
OG_06_0002844 (SeedPlants) Phylogenetic Tree(s): OG_06_0002844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005300.4.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00176p00050370 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.05 Archaeplastida
AT1G68050 ADO3, FKF1 flavin-binding, kelch repeat, f box 1 0.07 Archaeplastida
GSVIVT01011652001 No alias External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
LOC_Os06g47890.2 No alias component ADO of SCF E3 ubiquitin ligase complex.... 0.02 Archaeplastida
LOC_Os11g34460.1 No alias component ADO of SCF E3 ubiquitin ligase complex.... 0.1 Archaeplastida
Pp3c16_19240V3.1 No alias Kelch repeat-containing F-box family protein 0.03 Archaeplastida
Smo174189 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
Zm00001e011193_P002 No alias component ADO of SCF E3 ubiquitin ligase complex.... 0.07 Archaeplastida
Zm00001e024573_P003 No alias component ADO of SCF E3 ubiquitin ligase complex.... 0.08 Archaeplastida
Zm00001e040068_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 228 266
IPR000014 PAS 71 178
No external refs found!