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  5. Solyc01g005570.4.1

Solyc01g005570.4.1


Description : no hits & (original description: none)


Gene families : OG0000485 (Archaeplastida) Phylogenetic Tree(s): OG0000485_tree ,
OG_05_0000557 (LandPlants) Phylogenetic Tree(s): OG_05_0000557_tree ,
OG_06_0000501 (SeedPlants) Phylogenetic Tree(s): OG_06_0000501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005570.4.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT3G60410 No alias Protein of unknown function (DUF1639) 0.04 Archaeplastida
LOC_Os01g49410.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_125564g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e020122_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026451_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032335_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR012438 DUF1639 125 174
No external refs found!