Coexpression cluster: Cluster_8 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 3.64% (9/247) 2.72 1e-05 0.002795
GO:0016070 RNA metabolic process 4.45% (11/247) 1.91 0.0002 0.009049
GO:0044815 DNA packaging complex 2.02% (5/247) 3.28 0.000169 0.009184
GO:0032993 protein-DNA complex 2.02% (5/247) 3.28 0.000169 0.009184
GO:0000786 nucleosome 2.02% (5/247) 3.3 0.000158 0.014312
GO:0003676 nucleic acid binding 10.93% (27/247) 1.14 0.000106 0.014413
GO:0006397 mRNA processing 1.62% (4/247) 3.52 0.000408 0.0158
GO:0016071 mRNA metabolic process 1.62% (4/247) 3.3 0.000736 0.02217
GO:0044427 chromosomal part 2.02% (5/247) 2.83 0.00072 0.024393
GO:0071824 protein-DNA complex subunit organization 1.21% (3/247) 3.79 0.001322 0.029852
GO:0006325 chromatin organization 1.62% (4/247) 3.11 0.001217 0.029992
GO:0034728 nucleosome organization 1.21% (3/247) 3.84 0.001196 0.032413
GO:0004190 aspartic-type endopeptidase activity 0.81% (2/247) 4.94 0.001822 0.032913
GO:0070001 aspartic-type peptidase activity 0.81% (2/247) 4.94 0.001822 0.032913
GO:0090304 nucleic acid metabolic process 4.45% (11/247) 1.54 0.001615 0.033663
GO:0000375 RNA splicing, via transesterification reactions 0.81% (2/247) 4.52 0.003292 0.049568
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 0.81% (2/247) 4.52 0.003292 0.049568
GO:0000398 mRNA splicing, via spliceosome 0.81% (2/247) 4.52 0.003292 0.049568
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_11 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_22 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_23 0.052 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.038 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_145 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_233 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_258 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_16 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_74 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_78 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_89 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_114 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_209 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_71 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_29 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_71 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_124 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_248 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_281 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_303 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_322 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_329 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_13 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_86 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.085 Archaeplastida Compare
Zea mays HCCA Cluster_123 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_181 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_188 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_270 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_328 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.046 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_121 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_159 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_158 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_241 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_199 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_221 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_277 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_420 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_492 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_49 0.04 Archaeplastida Compare
Oryza sativa HCCA Cluster_85 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_138 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_161 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.044 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_241 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_255 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_291 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_309 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_311 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_318 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_332 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_82 0.037 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_172 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_37 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_45 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_156 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_218 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_59 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_160 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_192 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_224 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_247 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.02 Archaeplastida Compare
Sequences (247) (download table)

InterPro Domains

GO Terms

Family Terms