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  5. Solyc01g005780.1.1

Solyc01g005780.1.1


Description : Receptor-like protein Cf-9 homolog OS=Solanum lycopersicum (sp|o49879|cf0_sollc : 942.0)


Gene families : OG0001756 (Archaeplastida) Phylogenetic Tree(s): OG0001756_tree ,
OG_05_0001185 (LandPlants) Phylogenetic Tree(s): OG_05_0001185_tree ,
OG_06_0000788 (SeedPlants) Phylogenetic Tree(s): OG_06_0000788_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005780.1.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034788001 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.03 Archaeplastida
Solyc01g098370.1.1 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.06 Archaeplastida
Solyc03g082780.3.1 No alias Receptor-like protein Cf-9 OS=Solanum pimpinellifolium... 0.02 Archaeplastida
Solyc12g099870.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.05 Archaeplastida
Solyc12g100010.1.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 645 670
IPR001611 Leu-rich_rpt 143 164
IPR001611 Leu-rich_rpt 575 631
IPR001611 Leu-rich_rpt 431 490
IPR001611 Leu-rich_rpt 266 323
IPR001611 Leu-rich_rpt 194 251
IPR013210 LRR_N_plant-typ 29 86
IPR001611 Leu-rich_rpt 359 380
IPR001611 Leu-rich_rpt 114 130
No external refs found!