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  5. Solyc01g006180.4.1

Solyc01g006180.4.1


Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4i6|bpg2_arath : 429.0)


Gene families : OG0003350 (Archaeplastida) Phylogenetic Tree(s): OG0003350_tree ,
OG_05_0003850 (LandPlants) Phylogenetic Tree(s): OG_05_0003850_tree ,
OG_06_0012126 (SeedPlants) Phylogenetic Tree(s): OG_06_0012126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g006180.4.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00187430 evm_27.TU.AmTr_v1... GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 Archaeplastida
AT4G10620 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
Cre07.g315400 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 Archaeplastida
GSVIVT01025382001 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.06 Archaeplastida
Gb_19145 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 Archaeplastida
LOC_Os09g19980.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 Archaeplastida
Solyc04g009300.4.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 Archaeplastida
Zm00001e024057_P001 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.02 Archaeplastida
Zm00001e033957_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0034457 Mpp10 complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044452 nucleolar part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006073 GTP_binding_domain 327 401
No external refs found!