Coexpression cluster: Cluster_209 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006364 rRNA processing 4.44% (4/90) 5.98 0.0 3.9e-05
GO:0016072 rRNA metabolic process 4.44% (4/90) 5.98 0.0 3.9e-05
GO:0030684 preribosome 3.33% (3/90) 6.98 1e-06 8.3e-05
GO:0022613 ribonucleoprotein complex biogenesis 3.33% (3/90) 6.34 6e-06 0.000267
GO:0016070 RNA metabolic process 8.89% (8/90) 2.9 1.2e-05 0.000345
GO:0044085 cellular component biogenesis 3.33% (3/90) 6.06 1.2e-05 0.000396
GO:0005634 nucleus 6.67% (6/90) 3.39 2.4e-05 0.00058
GO:0090304 nucleic acid metabolic process 8.89% (8/90) 2.54 7.4e-05 0.001385
GO:0034470 ncRNA processing 4.44% (4/90) 4.21 6.8e-05 0.001428
GO:0006396 RNA processing 5.56% (5/90) 3.33 0.000146 0.002226
GO:0032040 small-subunit processome 2.22% (2/90) 6.76 0.000144 0.002413
GO:0043231 intracellular membrane-bounded organelle 6.67% (6/90) 2.83 0.00021 0.002717
GO:0043227 membrane-bounded organelle 6.67% (6/90) 2.83 0.00021 0.002717
GO:0034660 ncRNA metabolic process 4.44% (4/90) 3.63 0.000315 0.003781
GO:0003676 nucleic acid binding 14.44% (13/90) 1.54 0.000483 0.004503
GO:0042254 ribosome biogenesis 2.22% (2/90) 5.86 0.000528 0.004669
GO:0006139 nucleobase-containing compound metabolic process 8.89% (8/90) 2.14 0.000476 0.0047
GO:0043229 intracellular organelle 8.89% (8/90) 2.14 0.000476 0.0047
GO:0043226 organelle 8.89% (8/90) 2.14 0.000476 0.0047
GO:0046483 heterocycle metabolic process 8.89% (8/90) 2.02 0.000827 0.00695
GO:0006725 cellular aromatic compound metabolic process 8.89% (8/90) 2.01 0.000871 0.006968
GO:1901360 organic cyclic compound metabolic process 8.89% (8/90) 1.97 0.00103 0.007866
GO:0044452 nucleolar part 1.11% (1/90) 8.56 0.002641 0.016434
GO:0005732 small nucleolar ribonucleoprotein complex 1.11% (1/90) 8.56 0.002641 0.016434
GO:0034457 Mpp10 complex 1.11% (1/90) 8.56 0.002641 0.016434
GO:0042274 ribosomal small subunit biogenesis 1.11% (1/90) 8.56 0.002641 0.016434
GO:1990904 ribonucleoprotein complex 5.56% (5/90) 2.34 0.003144 0.018864
GO:0034641 cellular nitrogen compound metabolic process 10.0% (9/90) 1.62 0.002605 0.019026
GO:0030688 preribosome, small subunit precursor 1.11% (1/90) 7.56 0.005276 0.030562
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_23 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.075 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_72 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_109 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.116 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_194 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.044 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.045 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.043 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_234 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.079 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_246 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_247 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.052 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_55 0.032 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_131 0.036 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_144 0.048 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.044 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.035 Archaeplastida Compare
Gingko biloba HCCA Cluster_144 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_184 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_216 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_309 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.038 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.065 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.072 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.084 Archaeplastida Compare
Zea mays HCCA Cluster_346 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.052 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_85 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.045 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.058 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.043 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.121 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.079 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.051 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.051 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_49 0.087 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.072 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.061 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_82 0.044 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.049 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.086 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.071 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.084 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.036 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.161 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_118 0.022 Archaeplastida Compare
Sequences (90) (download table)

InterPro Domains

GO Terms

Family Terms