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  5. Solyc01g007170.4.1

Solyc01g007170.4.1


Description : no description available(sp|q9m2r0|ftip3_arath : 646.0)


Gene families : OG0000149 (Archaeplastida) Phylogenetic Tree(s): OG0000149_tree ,
OG_05_0000184 (LandPlants) Phylogenetic Tree(s): OG_05_0000184_tree ,
OG_06_0000152 (SeedPlants) Phylogenetic Tree(s): OG_06_0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g007170.4.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00091660 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00022p00218970 evm_27.TU.AmTr_v1... FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G04150 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 Archaeplastida
AT4G20080 No alias Calcium-dependent lipid-binding (CaLB domain) plant... 0.02 Archaeplastida
GSVIVT01008058001 No alias Protein QUIRKY OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032042001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_08022 No alias no description available(sp|q9m2r0|ftip3_arath : 1266.0) 0.03 Archaeplastida
Gb_22114 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_38760 No alias no description available(sp|q60ew9|ftip7_orysj : 968.0) 0.03 Archaeplastida
LOC_Os06g41090.1 No alias no description available(sp|q69t22|ftip1_orysj : 1449.0) 0.04 Archaeplastida
LOC_Os07g07070.1 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10427533g0010 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10431772g0010 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435265g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436836g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 197.0) 0.02 Archaeplastida
MA_3135258g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5279581g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 296.0) 0.03 Archaeplastida
MA_7640327g0010 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_80358g0010 No alias no description available(sp|q60ew9|ftip7_orysj : 423.0) 0.03 Archaeplastida
MA_80358g0020 No alias no description available(sp|q9m2r0|ftip3_arath : 704.0) 0.03 Archaeplastida
Mp6g00440.1 No alias no description available(sp|q60ew9|ftip7_orysj : 926.0) 0.03 Archaeplastida
Pp3c27_520V3.1 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 Archaeplastida
Zm00001e012377_P001 No alias no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.04 Archaeplastida
Zm00001e016221_P001 No alias no description available(sp|q9m2r0|ftip3_arath : 957.0) 0.05 Archaeplastida
Zm00001e027805_P001 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 795 950
IPR000008 C2_dom 10 100
IPR000008 C2_dom 599 702
IPR000008 C2_dom 282 382
IPR000008 C2_dom 438 551
No external refs found!