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  5. Solyc01g008410.3.1

Solyc01g008410.3.1


Description : Receptor-like protein Cf-9 homolog OS=Solanum lycopersicum (sp|o49879|cf0_sollc : 827.0)


Gene families : OG0001756 (Archaeplastida) Phylogenetic Tree(s): OG0001756_tree ,
OG_05_0001185 (LandPlants) Phylogenetic Tree(s): OG_05_0001185_tree ,
OG_06_0000788 (SeedPlants) Phylogenetic Tree(s): OG_06_0000788_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g008410.3.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Solyc01g014140.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g082780.3.1 No alias Receptor-like protein Cf-9 OS=Solanum pimpinellifolium... 0.02 Archaeplastida
Solyc06g008270.2.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.04 Archaeplastida
Solyc12g036800.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g049190.3.1 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.04 Archaeplastida
Solyc12g099870.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 57 72
IPR001611 Leu-rich_rpt 546 605
IPR001611 Leu-rich_rpt 274 333
IPR001611 Leu-rich_rpt 84 105
IPR013210 LRR_N_plant-typ 8 28
No external refs found!