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  5. Solyc01g008720.2.1

Solyc01g008720.2.1


Description : endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001045 (SeedPlants) Phylogenetic Tree(s): OG_06_0001045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g008720.2.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT5G66460 AtMAN7, MAN7 Glycosyl hydrolase superfamily protein 0.05 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
GSVIVT01037214001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
Gb_08848 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_29706 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_31304 No alias Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os05g25480.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_10358593g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10432193g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_111906g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_8194133g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_953274g0010 No alias No annotation 0.02 Archaeplastida
Mp8g13360.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Mp8g13380.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Pp3c2_29970V3.1 No alias Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.05 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.06 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Smo234867 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Solyc10g074920.2.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Solyc12g013770.3.1 No alias endo-beta-1,4-mannanase 0.07 Archaeplastida
Zm00001e029246_P001 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 45 336
No external refs found!