1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g009245.1.1

Solyc01g009245.1.1


Description : assembly factor CRR42 involved in NDH complex assembly


Gene families : OG0008786 (Archaeplastida) Phylogenetic Tree(s): OG0008786_tree ,
OG_05_0009218 (LandPlants) Phylogenetic Tree(s): OG_05_0009218_tree ,
OG_06_0011403 (SeedPlants) Phylogenetic Tree(s): OG_06_0011403_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g009245.1.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT5G20935 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.03 Archaeplastida
Zm00001e001503_P001 No alias assembly factor CRR42 involved in NDH complex assembly 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021495 DUF3148 47 109
No external refs found!