Coexpression cluster: Cluster_169 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009523 photosystem II 4.79% (8/167) 5.5 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 3.59% (6/167) 5.87 0.0 0.0
GO:0015979 photosynthesis 5.39% (9/167) 4.24 0.0 0.0
GO:1990204 oxidoreductase complex 3.59% (6/167) 5.73 0.0 0.0
GO:0009521 photosystem 4.79% (8/167) 4.44 0.0 0.0
GO:0019898 extrinsic component of membrane 2.99% (5/167) 6.29 0.0 0.0
GO:0044436 thylakoid part 4.79% (8/167) 4.3 0.0 0.0
GO:0044464 cell part 13.17% (22/167) 1.68 1e-06 5.8e-05
GO:1901566 organonitrogen compound biosynthetic process 7.78% (13/167) 2.29 3e-06 9.6e-05
GO:0044424 intracellular part 12.57% (21/167) 1.67 3e-06 0.000104
GO:1902494 catalytic complex 3.59% (6/167) 3.6 1.1e-05 0.000246
GO:0034641 cellular nitrogen compound metabolic process 10.78% (18/167) 1.73 9e-06 0.00026
GO:0098796 membrane protein complex 4.79% (8/167) 2.96 1e-05 0.000262
GO:0032991 protein-containing complex 9.58% (16/167) 1.85 1.1e-05 0.000263
GO:0044271 cellular nitrogen compound biosynthetic process 7.78% (13/167) 2.03 2.1e-05 0.000407
GO:0044237 cellular metabolic process 19.76% (33/167) 1.11 2e-05 0.000422
GO:0006418 tRNA aminoacylation for protein translation 2.4% (4/167) 4.46 3.2e-05 0.000567
GO:0008152 metabolic process 27.54% (46/167) 0.85 3.1e-05 0.000574
GO:0043038 amino acid activation 2.4% (4/167) 4.35 4.4e-05 0.000635
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.4% (4/167) 4.35 4.4e-05 0.000635
GO:0043039 tRNA aminoacylation 2.4% (4/167) 4.35 4.4e-05 0.000635
GO:0004812 aminoacyl-tRNA ligase activity 2.4% (4/167) 4.35 4.4e-05 0.000635
GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity 1.2% (2/167) 7.09 7.1e-05 0.00075
GO:0034312 diol biosynthetic process 1.2% (2/167) 7.09 7.1e-05 0.00075
GO:0034311 diol metabolic process 1.2% (2/167) 7.09 7.1e-05 0.00075
GO:0046146 tetrahydrobiopterin metabolic process 1.2% (2/167) 7.09 7.1e-05 0.00075
GO:0006729 tetrahydrobiopterin biosynthetic process 1.2% (2/167) 7.09 7.1e-05 0.00075
GO:0043043 peptide biosynthetic process 5.39% (9/167) 2.4 5.9e-05 0.000812
GO:0006518 peptide metabolic process 5.39% (9/167) 2.37 7.1e-05 0.000889
GO:0043603 cellular amide metabolic process 5.39% (9/167) 2.32 8.9e-05 0.000903
GO:0043604 amide biosynthetic process 5.39% (9/167) 2.37 6.9e-05 0.000906
GO:0044249 cellular biosynthetic process 8.38% (14/167) 1.68 0.000134 0.001316
GO:1901576 organic substance biosynthetic process 8.38% (14/167) 1.61 0.000219 0.002094
GO:0051540 metal cluster binding 2.4% (4/167) 3.72 0.000249 0.002177
GO:0051536 iron-sulfur cluster binding 2.4% (4/167) 3.72 0.000249 0.002177
GO:0005840 ribosome 4.79% (8/167) 2.28 0.000263 0.002178
GO:0042559 pteridine-containing compound biosynthetic process 1.2% (2/167) 6.35 0.000236 0.002191
GO:0009987 cellular process 20.36% (34/167) 0.9 0.000258 0.002198
GO:0006520 cellular amino acid metabolic process 2.99% (5/167) 3.14 0.000275 0.002225
GO:0006412 translation 4.79% (8/167) 2.25 0.000314 0.00247
GO:0003735 structural constituent of ribosome 4.79% (8/167) 2.23 0.000332 0.002553
GO:0140101 catalytic activity, acting on a tRNA 2.4% (4/167) 3.59 0.000355 0.0026
GO:0042558 pteridine-containing compound metabolic process 1.2% (2/167) 6.09 0.000354 0.002652
GO:0043232 intracellular non-membrane-bounded organelle 4.79% (8/167) 2.15 0.00049 0.003431
GO:0043228 non-membrane-bounded organelle 4.79% (8/167) 2.15 0.00049 0.003431
GO:0009059 macromolecule biosynthetic process 5.99% (10/167) 1.85 0.000503 0.003445
GO:0005198 structural molecule activity 4.79% (8/167) 2.13 0.000545 0.003576
GO:1990904 ribonucleoprotein complex 4.79% (8/167) 2.13 0.000535 0.003589
GO:0009058 biosynthetic process 8.38% (14/167) 1.47 0.000576 0.003703
GO:0043226 organelle 6.59% (11/167) 1.71 0.000611 0.003774
GO:0043229 intracellular organelle 6.59% (11/167) 1.71 0.000611 0.003774
GO:0046173 polyol biosynthetic process 1.2% (2/167) 5.67 0.000656 0.003897
GO:0046165 alcohol biosynthetic process 1.2% (2/167) 5.67 0.000656 0.003897
GO:0005575 cellular_component 16.17% (27/167) 0.93 0.000891 0.005198
GO:0016874 ligase activity 2.4% (4/167) 3.18 0.001025 0.005868
GO:0034645 cellular macromolecule biosynthetic process 5.39% (9/167) 1.79 0.001309 0.007363
GO:0006399 tRNA metabolic process 2.4% (4/167) 3.07 0.001353 0.007477
GO:0044444 cytoplasmic part 5.99% (10/167) 1.66 0.001402 0.007613
GO:0005509 calcium ion binding 2.99% (5/167) 2.59 0.00155 0.008136
GO:1901617 organic hydroxy compound biosynthetic process 1.2% (2/167) 5.09 0.001526 0.008146
GO:0051186 cofactor metabolic process 2.4% (4/167) 3.0 0.001628 0.008409
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.2% (2/167) 4.97 0.001797 0.009132
GO:0046872 metal ion binding 8.98% (15/167) 1.23 0.001958 0.009788
GO:0043169 cation binding 8.98% (15/167) 1.23 0.002016 0.009922
GO:0016860 intramolecular oxidoreductase activity 1.2% (2/167) 4.77 0.002404 0.01165
GO:0044425 membrane part 7.19% (12/167) 1.38 0.002492 0.011892
GO:0034660 ncRNA metabolic process 2.4% (4/167) 2.74 0.003121 0.014457
GO:0016836 hydro-lyase activity 1.2% (2/167) 4.59 0.003094 0.014546
GO:0140098 catalytic activity, acting on RNA 2.99% (5/167) 2.31 0.003556 0.016233
GO:0006419 alanyl-tRNA aminoacylation 0.6% (1/167) 7.67 0.004901 0.019297
GO:0006438 valyl-tRNA aminoacylation 0.6% (1/167) 7.67 0.004901 0.019297
GO:0004813 alanine-tRNA ligase activity 0.6% (1/167) 7.67 0.004901 0.019297
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 0.6% (1/167) 7.67 0.004901 0.019297
GO:0005886 plasma membrane 0.6% (1/167) 7.67 0.004901 0.019297
GO:0004832 valine-tRNA ligase activity 0.6% (1/167) 7.67 0.004901 0.019297
GO:0015995 chlorophyll biosynthetic process 0.6% (1/167) 7.67 0.004901 0.019297
GO:0004366 glycerol-3-phosphate O-acyltransferase activity 0.6% (1/167) 7.67 0.004901 0.019297
GO:0044281 small molecule metabolic process 4.19% (7/167) 1.79 0.004472 0.020123
GO:0005737 cytoplasm 1.8% (3/167) 3.17 0.004588 0.020357
GO:0016853 isomerase activity 2.4% (4/167) 2.57 0.004716 0.020632
GO:0008150 biological_process 31.74% (53/167) 0.47 0.005797 0.022543
GO:0051188 cofactor biosynthetic process 1.8% (3/167) 3.01 0.006255 0.02403
GO:0019751 polyol metabolic process 1.2% (2/167) 4.03 0.006652 0.025244
GO:1901564 organonitrogen compound metabolic process 12.57% (21/167) 0.84 0.006742 0.025284
GO:0006066 alcohol metabolic process 1.2% (2/167) 3.92 0.007733 0.028656
GO:0043436 oxoacid metabolic process 2.99% (5/167) 2.03 0.00796 0.02882
GO:0019752 carboxylic acid metabolic process 2.99% (5/167) 2.03 0.00796 0.02882
GO:0006082 organic acid metabolic process 2.99% (5/167) 2.02 0.00809 0.02896
GO:0046422 violaxanthin de-epoxidase activity 0.6% (1/167) 6.67 0.009778 0.034223
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 0.6% (1/167) 6.67 0.009778 0.034223
GO:1901615 organic hydroxy compound metabolic process 1.2% (2/167) 3.67 0.010754 0.037224
GO:0046483 heterocycle metabolic process 5.39% (9/167) 1.3 0.011799 0.040399
GO:0016491 oxidoreductase activity 8.38% (14/167) 0.98 0.012072 0.04089
GO:0006725 cellular aromatic compound metabolic process 5.39% (9/167) 1.28 0.012376 0.041473
GO:0004807 triose-phosphate isomerase activity 0.6% (1/167) 6.09 0.014631 0.044746
GO:0009089 lysine biosynthetic process via diaminopimelate 0.6% (1/167) 6.09 0.014631 0.044746
GO:0006553 lysine metabolic process 0.6% (1/167) 6.09 0.014631 0.044746
GO:0004751 ribose-5-phosphate isomerase activity 0.6% (1/167) 6.09 0.014631 0.044746
GO:0009052 pentose-phosphate shunt, non-oxidative branch 0.6% (1/167) 6.09 0.014631 0.044746
GO:0046451 diaminopimelate metabolic process 0.6% (1/167) 6.09 0.014631 0.044746
GO:0009085 lysine biosynthetic process 0.6% (1/167) 6.09 0.014631 0.044746
GO:0015994 chlorophyll metabolic process 0.6% (1/167) 6.09 0.014631 0.044746
GO:0016070 RNA metabolic process 3.59% (6/167) 1.6 0.01514 0.045856
GO:0006807 nitrogen compound metabolic process 13.77% (23/167) 0.69 0.015491 0.046474
GO:1901360 organic cyclic compound metabolic process 5.39% (9/167) 1.25 0.014453 0.047922
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_29 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.05 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_86 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.118 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_102 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.059 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_151 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.129 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.055 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_22 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_23 0.042 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_29 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_56 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_59 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_119 0.049 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.088 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_179 0.06 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.065 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_95 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_98 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.083 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.054 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.047 Archaeplastida Compare
Gingko biloba HCCA Cluster_148 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.043 Archaeplastida Compare
Gingko biloba HCCA Cluster_269 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.049 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.066 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.076 Archaeplastida Compare
Zea mays HCCA Cluster_133 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_146 0.086 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_187 0.075 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_212 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_266 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.074 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.05 Archaeplastida Compare
Zea mays HCCA Cluster_319 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.07 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.11 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.064 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_83 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.04 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_123 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_177 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_4 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.051 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_57 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_88 0.06 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.083 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.083 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_225 0.037 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.05 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_27 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.05 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.055 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.046 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.037 Archaeplastida Compare
Picea abies HCCA Cluster_292 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_324 0.058 Archaeplastida Compare
Picea abies HCCA Cluster_343 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_445 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.056 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.04 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.079 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.099 Archaeplastida Compare
Oryza sativa HCCA Cluster_148 0.056 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.054 Archaeplastida Compare
Oryza sativa HCCA Cluster_197 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_243 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_248 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.057 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.042 Archaeplastida Compare
Oryza sativa HCCA Cluster_321 0.032 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.05 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.048 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_120 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_129 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_140 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_150 0.033 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_186 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_34 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_228 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_27 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_47 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.043 Archaeplastida Compare
Vitis vinifera HCCA Cluster_70 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.053 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.116 Archaeplastida Compare
Vitis vinifera HCCA Cluster_113 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_137 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.09 Archaeplastida Compare
Vitis vinifera HCCA Cluster_176 0.077 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.046 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.088 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.048 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.054 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.071 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.045 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_119 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_129 0.026 Archaeplastida Compare
Sequences (167) (download table)

InterPro Domains

GO Terms

Family Terms