Solyc01g009340.4.1


Description : no hits & (original description: none)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0003290 (LandPlants) Phylogenetic Tree(s): OG_05_0003290_tree ,
OG_06_0002627 (SeedPlants) Phylogenetic Tree(s): OG_06_0002627_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g009340.4.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00021p00158910 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00053p00180370 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00066p00152910 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-plasma membrane-cell wall... 0.04 Archaeplastida
AMTR_s00090p00129130 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00109p00027450 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G01110 IQD18 IQ-domain 18 0.05 Archaeplastida
AT1G17480 IQD7 IQ-domain 7 0.14 Archaeplastida
AT1G72670 iqd8 IQ-domain 8 0.03 Archaeplastida
AT3G51380 IQD20 IQ-domain 20 0.04 Archaeplastida
AT5G35670 iqd33 IQ-domain 33 0.05 Archaeplastida
GSVIVT01019668001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01035382001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01038630001 No alias No description available 0.16 Archaeplastida
Gb_18106 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_36296 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g61720.8 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g04210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57330.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g06160.2 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g02250.1 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_19597g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g23600.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g08970.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c12_25060V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Pp3c21_11850V3.1 No alias IQ-domain 3 0.02 Archaeplastida
Pp3c26_2929V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Pp3c4_3290V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Solyc02g077260.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc09g007410.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc10g008790.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e016563_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020006_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021855_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027583_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e031848_P002 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!