AMTR_s00021p00186910 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.146

Description : Multi-process regulation.Rop GTPase regulatory system.Rop small GTPase

Gene families : OG0000554 (Archaeplastida) Phylogenetic Tree(s): OG0000554_tree ,
OG_05_0000532 (LandPlants) Phylogenetic Tree(s): OG_05_0000532_tree ,
OG_06_0000373 (SeedPlants) Phylogenetic Tree(s): OG_06_0000373_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00021p00186910
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AT4G35020	ARAC3, RAC3,...	RAC-like 3	0.03	Archaeplastida
AT5G45970	ARAC2, RAC2,...	RAC-like 2	0.06	Archaeplastida
GSVIVT01018729001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.04	Archaeplastida
GSVIVT01020653001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.06	Archaeplastida
GSVIVT01021145001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.08	Archaeplastida
GSVIVT01024029001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.04	Archaeplastida
LOC_Os02g20850.1	No alias	small GTPase (ROP)	0.05	Archaeplastida
LOC_Os02g50860.1	No alias	small GTPase (ROP)	0.06	Archaeplastida
LOC_Os05g43820.1	No alias	small GTPase (ROP)	0.06	Archaeplastida
LOC_Os06g12790.1	No alias	small GTPase (ROP)	0.02	Archaeplastida
MA_10209003g0010	No alias	Rac-like GTP-binding protein 7 OS=Oryza sativa subsp....	0.02	Archaeplastida
MA_11461g0010	No alias	small GTPase (ROP)	0.03	Archaeplastida
MA_36432g0010	No alias	small GTPase (ROP)	0.04	Archaeplastida
MA_948089g0010	No alias	small GTPase (ROP)	0.02	Archaeplastida
Mp7g17540.1	No alias	small GTPase (ROP)	0.02	Archaeplastida
Solyc02g077400.4.1	No alias	small GTPase (ROP)	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Neighborhood
BP	GO:0000910	cytokinesis	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Neighborhood
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008017	microtubule binding	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
MF	GO:0070001	aspartic-type peptidase activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	9	179

External Links

No external refs found!

AMTR_s00021p00186910 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation