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  5. AMTR_s00021p00187850

AMTR_s00021p00187850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.148

Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00187850
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00169p00042500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
AT1G06280 LBD2 LOB domain-containing protein 2 0.13 Archaeplastida
AT1G07900 LBD1 LOB domain-containing protein 1 0.02 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.03 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.11 Archaeplastida
AT2G28500 LBD11 LOB domain-containing protein 11 0.02 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.03 Archaeplastida
GSVIVT01003546001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01003547001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 Archaeplastida
GSVIVT01004323001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 Archaeplastida
GSVIVT01006269001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
GSVIVT01016334001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01018486001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01032592001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
Gb_08465 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_20676 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Gb_23688 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_29853 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Gb_38978 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_40684 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_40767 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os01g14030.1 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
LOC_Os03g17810.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_127139g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_16646g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Mp4g10500.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp5g17820.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp7g00650.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp7g17250.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc02g087570.1.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc03g095940.1.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g005090.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g082310.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc12g010810.1.1 No alias transcription factor (AS2/LOB) 0.12 Archaeplastida
Zm00001e019004_P002 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e030195_P001 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 10 108
No external refs found!