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  5. Solyc01g017090.2.1

Solyc01g017090.2.1


Description : NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Solanum lycopersicum (sp|q32516|nu5c_sollc : 303.0)


Gene families : OG0001390 (Archaeplastida) Phylogenetic Tree(s): OG0001390_tree ,
OG_05_0001018 (LandPlants) Phylogenetic Tree(s): OG_05_0001018_tree ,
OG_06_0000769 (SeedPlants) Phylogenetic Tree(s): OG_06_0000769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g017090.2.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
ATCG01010 NDHF NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein 0.08 Archaeplastida
Gb_27036 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_31814 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.08 Archaeplastida
Gb_31815 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.05 Archaeplastida
LOC_Os10g21418.1 No alias component NdhF of NDH membrane subcomplex M 0.06 Archaeplastida
Mp5g04270.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc00g500098.1.1 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Triticum... 0.05 Archaeplastida
Solyc00g500195.1.1 No alias component NdhF of NDH membrane subcomplex M 0.1 Archaeplastida
Solyc00g500271.1.1 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Triticum... 0.05 Archaeplastida
Solyc00g500317.1.1 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Triticum... 0.06 Archaeplastida
Solyc02g011720.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.1 Archaeplastida
Solyc11g021190.2.1 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 141 195
IPR001516 Proton_antipo_N 72 129
No external refs found!