Coexpression cluster: Cluster_3 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0015035 protein disulfide oxidoreductase activity 16.09% (14/87) 6.59 0.0 0.0
GO:0015036 disulfide oxidoreductase activity 16.09% (14/87) 6.59 0.0 0.0
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors 16.09% (14/87) 6.29 0.0 0.0
GO:0009055 electron transfer activity 18.39% (16/87) 5.13 0.0 0.0
GO:0016491 oxidoreductase activity 19.54% (17/87) 2.2 0.0 5e-06
GO:1901566 organonitrogen compound biosynthetic process 11.49% (10/87) 2.85 1e-06 4e-05
GO:0006518 peptide metabolic process 9.2% (8/87) 3.14 4e-06 5.8e-05
GO:0005198 structural molecule activity 9.2% (8/87) 3.07 5e-06 5.9e-05
GO:0043043 peptide biosynthetic process 9.2% (8/87) 3.17 3e-06 5.9e-05
GO:0043232 intracellular non-membrane-bounded organelle 9.2% (8/87) 3.09 5e-06 5.9e-05
GO:0043228 non-membrane-bounded organelle 9.2% (8/87) 3.09 5e-06 5.9e-05
GO:1990904 ribonucleoprotein complex 9.2% (8/87) 3.07 5e-06 6.2e-05
GO:0044271 cellular nitrogen compound biosynthetic process 11.49% (10/87) 2.59 6e-06 6.2e-05
GO:0043604 amide biosynthetic process 9.2% (8/87) 3.14 4e-06 6.2e-05
GO:0044444 cytoplasmic part 11.49% (10/87) 2.6 6e-06 6.4e-05
GO:0005840 ribosome 9.2% (8/87) 3.23 2e-06 6.4e-05
GO:0003735 structural constituent of ribosome 9.2% (8/87) 3.17 3e-06 6.4e-05
GO:0043603 cellular amide metabolic process 9.2% (8/87) 3.09 5e-06 6.7e-05
GO:0006412 translation 9.2% (8/87) 3.19 3e-06 6.8e-05
GO:0043229 intracellular organelle 11.49% (10/87) 2.51 1e-05 9.2e-05
GO:0043226 organelle 11.49% (10/87) 2.51 1e-05 9.2e-05
GO:0034641 cellular nitrogen compound metabolic process 13.79% (12/87) 2.09 2.4e-05 0.000207
GO:0044249 cellular biosynthetic process 11.49% (10/87) 2.14 9.1e-05 0.000518
GO:0009161 ribonucleoside monophosphate metabolic process 4.6% (4/87) 4.11 8.9e-05 0.000523
GO:0009126 purine nucleoside monophosphate metabolic process 4.6% (4/87) 4.11 8.9e-05 0.000523
GO:0009123 nucleoside monophosphate metabolic process 4.6% (4/87) 4.11 8.9e-05 0.000523
GO:0009167 purine ribonucleoside monophosphate metabolic process 4.6% (4/87) 4.11 8.9e-05 0.000523
GO:0009141 nucleoside triphosphate metabolic process 4.6% (4/87) 4.07 9.7e-05 0.000535
GO:0009059 macromolecule biosynthetic process 9.2% (8/87) 2.47 0.000101 0.000538
GO:0034645 cellular macromolecule biosynthetic process 9.2% (8/87) 2.56 6.6e-05 0.00054
GO:0005575 cellular_component 21.84% (19/87) 1.36 0.000107 0.000554
GO:0009144 purine nucleoside triphosphate metabolic process 4.6% (4/87) 4.14 8.2e-05 0.000568
GO:0009199 ribonucleoside triphosphate metabolic process 4.6% (4/87) 4.14 8.2e-05 0.000568
GO:0009205 purine ribonucleoside triphosphate metabolic process 4.6% (4/87) 4.14 8.2e-05 0.000568
GO:1902600 proton transmembrane transport 4.6% (4/87) 4.12 8.6e-05 0.000572
GO:0046034 ATP metabolic process 4.6% (4/87) 4.15 7.8e-05 0.000611
GO:0009259 ribonucleotide metabolic process 4.6% (4/87) 3.94 0.000139 0.000667
GO:0009150 purine ribonucleotide metabolic process 4.6% (4/87) 3.94 0.000139 0.000667
GO:1901576 organic substance biosynthetic process 11.49% (10/87) 2.07 0.000136 0.000686
GO:0006163 purine nucleotide metabolic process 4.6% (4/87) 3.9 0.000156 0.000728
GO:0072521 purine-containing compound metabolic process 4.6% (4/87) 3.89 0.000161 0.000736
GO:0019693 ribose phosphate metabolic process 4.6% (4/87) 3.86 0.000173 0.000772
GO:0015672 monovalent inorganic cation transport 4.6% (4/87) 3.77 0.000221 0.00096
GO:0098660 inorganic ion transmembrane transport 4.6% (4/87) 3.67 0.000285 0.001136
GO:0098662 inorganic cation transmembrane transport 4.6% (4/87) 3.67 0.000285 0.001136
GO:0098655 cation transmembrane transport 4.6% (4/87) 3.67 0.000285 0.001136
GO:0009058 biosynthetic process 11.49% (10/87) 1.93 0.000295 0.001149
GO:0009117 nucleotide metabolic process 4.6% (4/87) 3.68 0.000277 0.001176
GO:0006753 nucleoside phosphate metabolic process 4.6% (4/87) 3.64 0.000313 0.001194
GO:0034220 ion transmembrane transport 4.6% (4/87) 3.55 0.000395 0.001478
GO:0032991 protein-containing complex 10.34% (9/87) 1.96 0.000514 0.001884
GO:0055086 nucleobase-containing small molecule metabolic process 4.6% (4/87) 3.42 0.000546 0.001965
GO:0017144 drug metabolic process 4.6% (4/87) 3.37 0.000635 0.002201
GO:0044424 intracellular part 12.64% (11/87) 1.68 0.000628 0.002214
GO:0044464 cell part 12.64% (11/87) 1.62 0.000856 0.002912
GO:1901564 organonitrogen compound metabolic process 17.24% (15/87) 1.3 0.001003 0.003351
GO:1901135 carbohydrate derivative metabolic process 4.6% (4/87) 3.11 0.001241 0.004071
GO:0019637 organophosphate metabolic process 4.6% (4/87) 2.98 0.00169 0.005448
GO:0015986 ATP synthesis coupled proton transport 2.3% (2/87) 4.37 0.004268 0.0133
GO:0015985 energy coupled proton transport, down electrochemical gradient 2.3% (2/87) 4.37 0.004268 0.0133
GO:0006812 cation transport 4.6% (4/87) 2.56 0.004868 0.014922
GO:0006807 nitrogen compound metabolic process 17.24% (15/87) 1.01 0.006645 0.020042
GO:0044267 cellular protein metabolic process 11.49% (10/87) 1.24 0.009779 0.029026
GO:0016021 integral component of membrane 6.9% (6/87) 1.71 0.010249 0.029947
GO:0044425 membrane part 8.05% (7/87) 1.54 0.010535 0.030308
GO:0031224 intrinsic component of membrane 6.9% (6/87) 1.67 0.011476 0.032515
GO:0055085 transmembrane transport 6.9% (6/87) 1.66 0.012053 0.03364
GO:0044237 cellular metabolic process 17.24% (15/87) 0.91 0.012474 0.034302
GO:0009507 chloroplast 2.3% (2/87) 3.53 0.013161 0.035159
GO:0009536 plastid 2.3% (2/87) 3.53 0.013161 0.035159
GO:0006811 ion transport 4.6% (4/87) 2.1 0.014369 0.037846
GO:0019538 protein metabolic process 12.64% (11/87) 1.08 0.014638 0.038018
GO:0006754 ATP biosynthetic process 2.3% (2/87) 3.33 0.017067 0.041449
GO:0009142 nucleoside triphosphate biosynthetic process 2.3% (2/87) 3.33 0.017067 0.041449
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.3% (2/87) 3.33 0.017067 0.041449
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.3% (2/87) 3.33 0.017067 0.041449
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.3% (2/87) 3.33 0.017067 0.041449
GO:0009156 ribonucleoside monophosphate biosynthetic process 2.3% (2/87) 3.27 0.018324 0.042303
GO:0009127 purine nucleoside monophosphate biosynthetic process 2.3% (2/87) 3.27 0.018324 0.042303
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 2.3% (2/87) 3.27 0.018324 0.042303
GO:0009124 nucleoside monophosphate biosynthetic process 2.3% (2/87) 3.27 0.018324 0.042303
GO:0009260 ribonucleotide biosynthetic process 2.3% (2/87) 3.22 0.019618 0.043674
GO:0009152 purine ribonucleotide biosynthetic process 2.3% (2/87) 3.22 0.019618 0.043674
GO:0046390 ribose phosphate biosynthetic process 2.3% (2/87) 3.22 0.019618 0.043674
GO:0006164 purine nucleotide biosynthetic process 2.3% (2/87) 3.17 0.02095 0.046091
GO:0072522 purine-containing compound biosynthetic process 2.3% (2/87) 3.15 0.021402 0.046538
GO:0044281 small molecule metabolic process 4.6% (4/87) 1.92 0.021709 0.046663
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.056 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_36 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_41 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_47 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_84 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_93 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_107 0.053 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_150 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_201 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_235 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_244 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_1 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_90 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_92 0.049 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_142 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_199 0.044 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_243 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_1 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_30 0.034 Archaeplastida Compare
Gingko biloba HCCA Cluster_78 0.058 Archaeplastida Compare
Gingko biloba HCCA Cluster_89 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_226 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_237 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_255 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_5 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_44 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_83 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_98 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_109 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.057 Archaeplastida Compare
Zea mays HCCA Cluster_255 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_308 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_330 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_362 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_8 0.04 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_14 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_78 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_80 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_86 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_109 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_10 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_23 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_82 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_128 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_143 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_171 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_223 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_351 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_355 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_431 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_439 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_459 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_521 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_4 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_23 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_65 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_85 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_115 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_125 0.083 Archaeplastida Compare
Oryza sativa HCCA Cluster_163 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_186 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_199 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_210 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_223 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_233 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_303 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_331 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_27 0.069 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_28 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_138 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_1 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_4 0.045 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_5 0.051 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_12 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_16 0.079 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_24 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_29 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_34 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_48 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_52 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_57 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_61 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_64 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_65 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_66 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_67 0.061 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_74 0.045 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_78 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_80 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_82 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_83 0.076 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_85 0.044 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_87 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_90 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_93 0.041 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_94 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_95 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_97 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_108 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_113 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_117 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_126 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_137 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_138 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_149 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_156 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_171 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_172 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_176 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_179 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_187 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_188 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_189 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_194 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_197 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_201 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_208 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_230 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_234 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_241 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_246 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_271 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_279 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_287 0.053 Archaeplastida Compare
Vitis vinifera HCCA Cluster_20 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_28 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_99 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_145 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_169 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_240 0.021 Archaeplastida Compare
Sequences (87) (download table)

InterPro Domains

GO Terms

Family Terms