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  5. Solyc01g056810.4.1

Solyc01g056810.4.1


Description : SYP1-group Qa-type SNARE component


Gene families : OG0000372 (Archaeplastida) Phylogenetic Tree(s): OG0000372_tree ,
OG_05_0002991 (LandPlants) Phylogenetic Tree(s): OG_05_0002991_tree ,
OG_06_0004212 (SeedPlants) Phylogenetic Tree(s): OG_06_0004212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g056810.4.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Pp3c17_14090V3.1 No alias syntaxin of plants 124 0.04 Archaeplastida
Zm00001e018305_P001 No alias SYP1-group Qa-type SNARE component 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
MF GO:0098519 nucleotide phosphatase activity, acting on free nucleotides IEP Neighborhood
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 189 240
IPR006011 Syntaxin_N 6 187
No external refs found!