AMTR_s00021p00209320 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.181

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0001191 (Archaeplastida) Phylogenetic Tree(s): OG0001191_tree ,
OG_05_0000735 (LandPlants) Phylogenetic Tree(s): OG_05_0000735_tree ,
OG_06_0001171 (SeedPlants) Phylogenetic Tree(s): OG_06_0001171_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00021p00209320
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
AT1G28470	SND3, NAC010, ANAC010	NAC domain containing protein 10	0.07	Archaeplastida
AT4G28500	NAC073, ANAC073, SND2	NAC domain containing protein 73	0.05	Archaeplastida
GSVIVT01020609001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
LOC_Os01g48130.2	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g38130.1	No alias	DNA damage response regulator (SOG1). transcription factor (NAC)	0.04	Archaeplastida
LOC_Os05g48850.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os06g36480.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g077610.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc05g026180.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc07g053590.4.1	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e020204_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e022870_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e025957_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e028029_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	68	208

External Links

No external refs found!