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  5. Solyc01g058170.4.1

Solyc01g058170.4.1


Description : histone H3K9 methylation reader (AGDP1)


Gene families : OG0001346 (Archaeplastida) Phylogenetic Tree(s): OG0001346_tree ,
OG_05_0000788 (LandPlants) Phylogenetic Tree(s): OG_05_0000788_tree ,
OG_06_0000886 (SeedPlants) Phylogenetic Tree(s): OG_06_0000886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g058170.4.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g04180.1 No alias no description available(sp|q500v5|agdp1_arath : 154.0) 0.02 Archaeplastida
MA_10425924g0010 No alias histone H3K9 methylation reader (AGDP1) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 90 150
No external refs found!