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  5. Solyc01g066840.3.1

Solyc01g066840.3.1


Description : component RPS21 of SSU proteome


Gene families : OG0002316 (Archaeplastida) Phylogenetic Tree(s): OG0002316_tree ,
OG_05_0003260 (LandPlants) Phylogenetic Tree(s): OG_05_0003260_tree ,
OG_06_0003911 (SeedPlants) Phylogenetic Tree(s): OG_06_0003911_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g066840.3.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00200410 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
AT3G53890 No alias Ribosomal protein S21e 0.09 Archaeplastida
AT5G27700 No alias Ribosomal protein S21e 0.19 Archaeplastida
Cre03.g203450 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
GSVIVT01017756001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
GSVIVT01031151001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 Archaeplastida
Gb_27652 No alias component RPS21 of SSU proteome 0.09 Archaeplastida
Gb_35516 No alias component RPS21 of SSU proteome 0.07 Archaeplastida
LOC_Os03g46490.1 No alias component RPS21 of SSU proteome 0.04 Archaeplastida
MA_73657g0010 No alias component RPS21 of SSU proteome 0.04 Archaeplastida
Mp4g22150.1 No alias component RPS21 of SSU proteome 0.05 Archaeplastida
Pp3c12_25030V3.1 No alias Ribosomal protein S21e 0.2 Archaeplastida
Pp3c24_8160V3.1 No alias Ribosomal protein S21e 0.05 Archaeplastida
Pp3c26_3000V3.1 No alias Ribosomal protein S21e 0.15 Archaeplastida
Pp3c4_3220V3.1 No alias Ribosomal protein S21e 0.11 Archaeplastida
Smo271040 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Zm00001e001637_P002 No alias component RPS21 of SSU proteome 0.18 Archaeplastida
Zm00001e011684_P002 No alias component RPS21 of SSU proteome 0.12 Archaeplastida
Zm00001e031393_P002 No alias component RPS21 of SSU proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 1 77
No external refs found!