Coexpression cluster: Cluster_155 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043228 non-membrane-bounded organelle 12.24% (12/98) 3.5 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 12.24% (12/98) 3.5 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 15.31% (15/98) 3.01 0.0 0.0
GO:0005198 structural molecule activity 12.24% (12/98) 3.48 0.0 0.0
GO:1990904 ribonucleoprotein complex 12.24% (12/98) 3.48 0.0 0.0
GO:0044444 cytoplasmic part 15.31% (15/98) 3.01 0.0 0.0
GO:0043603 cellular amide metabolic process 12.24% (12/98) 3.51 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 14.29% (14/98) 3.17 0.0 0.0
GO:0006518 peptide metabolic process 12.24% (12/98) 3.55 0.0 0.0
GO:0043043 peptide biosynthetic process 12.24% (12/98) 3.58 0.0 0.0
GO:0043604 amide biosynthetic process 12.24% (12/98) 3.56 0.0 0.0
GO:0003735 structural constituent of ribosome 12.24% (12/98) 3.59 0.0 0.0
GO:0006412 translation 12.24% (12/98) 3.6 0.0 0.0
GO:0005840 ribosome 12.24% (12/98) 3.64 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 13.27% (13/98) 3.09 0.0 0.0
GO:0032991 protein-containing complex 16.33% (16/98) 2.62 0.0 0.0
GO:0009059 macromolecule biosynthetic process 13.27% (13/98) 3.0 0.0 0.0
GO:0044249 cellular biosynthetic process 15.31% (15/98) 2.55 0.0 1e-06
GO:1901576 organic substance biosynthetic process 15.31% (15/98) 2.48 0.0 1e-06
GO:0009058 biosynthetic process 15.31% (15/98) 2.34 0.0 3e-06
GO:0043226 organelle 12.24% (12/98) 2.6 1e-06 7e-06
GO:0043229 intracellular organelle 12.24% (12/98) 2.6 1e-06 7e-06
GO:0034641 cellular nitrogen compound metabolic process 15.31% (15/98) 2.24 1e-06 7e-06
GO:0008274 gamma-tubulin ring complex 2.04% (2/98) 8.44 8e-06 6.4e-05
GO:0000931 gamma-tubulin large complex 2.04% (2/98) 8.44 8e-06 6.4e-05
GO:0000930 gamma-tubulin complex 2.04% (2/98) 8.44 8e-06 6.4e-05
GO:0031503 protein-containing complex localization 2.04% (2/98) 8.44 8e-06 6.4e-05
GO:0033566 gamma-tubulin complex localization 2.04% (2/98) 8.44 8e-06 6.4e-05
GO:0044450 microtubule organizing center part 2.04% (2/98) 8.44 8e-06 6.4e-05
GO:0034629 cellular protein-containing complex localization 2.04% (2/98) 8.44 8e-06 6.4e-05
GO:0044424 intracellular part 15.31% (15/98) 1.95 7e-06 7e-05
GO:0044464 cell part 15.31% (15/98) 1.9 1.1e-05 8.3e-05
GO:0070727 cellular macromolecule localization 2.04% (2/98) 4.69 0.002742 0.019598
GO:0034613 cellular protein localization 2.04% (2/98) 4.69 0.002742 0.019598
GO:0044267 cellular protein metabolic process 12.24% (12/98) 1.33 0.002922 0.019727
GO:0003919 FMN adenylyltransferase activity 1.02% (1/98) 8.44 0.002876 0.019968
GO:0044430 cytoskeletal part 2.04% (2/98) 4.27 0.00484 0.031785
GO:0005542 folic acid binding 1.02% (1/98) 7.44 0.005744 0.035789
GO:0072341 modified amino acid binding 1.02% (1/98) 7.44 0.005744 0.035789
GO:0044260 cellular macromolecule metabolic process 13.27% (13/98) 1.12 0.006574 0.039939
GO:0044237 cellular metabolic process 17.35% (17/98) 0.92 0.007683 0.045539
GO:1901564 organonitrogen compound metabolic process 14.29% (14/98) 1.03 0.008396 0.047446
GO:0005575 cellular_component 16.33% (16/98) 0.94 0.008349 0.048303
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_25 0.069 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_152 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_52 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_266 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.075 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_247 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_212 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_364 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_68 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_166 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_113 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_144 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_231 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.038 Archaeplastida Compare
Sequences (98) (download table)

InterPro Domains

GO Terms

Family Terms