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  5. Solyc01g068300.3.1

Solyc01g068300.3.1


Description : RDR2-polymerase regulator protein CLSY3/4


Gene families : OG0000450 (Archaeplastida) Phylogenetic Tree(s): OG0000450_tree ,
OG_05_0000597 (LandPlants) Phylogenetic Tree(s): OG_05_0000597_tree ,
OG_06_0000338 (SeedPlants) Phylogenetic Tree(s): OG_06_0000338_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g068300.3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013277001 No alias RNA biosynthesis.siRNA biogenesis.CLSY3/4 regulator protein 0.03 Archaeplastida
Mp4g09280.1 No alias Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g058705.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc08g061340.1.1 No alias SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis... 0.02 Archaeplastida
Solyc08g062080.1.1 No alias SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 190 296
IPR000330 SNF2_N 11 126
No external refs found!