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  5. Solyc01g079240.3.1

Solyc01g079240.3.1


Description : Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana (sp|o22898|lacs1_arath : 883.0) & Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond(50.6.2 : 449.7)


Gene families : OG0000625 (Archaeplastida) Phylogenetic Tree(s): OG0000625_tree ,
OG_05_0009047 (LandPlants) Phylogenetic Tree(s): OG_05_0009047_tree ,
OG_06_0006159 (SeedPlants) Phylogenetic Tree(s): OG_06_0006159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079240.3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00113600 evm_27.TU.AmTr_v1... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00003p00114270 evm_27.TU.AmTr_v1... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00003p00117760 evm_27.TU.AmTr_v1... Enzyme classification.EC_6 ligases.EC_6.2 ligase forming... 0.05 Archaeplastida
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.12 Archaeplastida
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.09 Archaeplastida
GSVIVT01031892001 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_09959 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Gb_18621 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_32132 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.11 Archaeplastida
LOC_Os01g48910.2 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g04170.1 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432761g0010 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.11 Archaeplastida
MA_839621g0010 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Mp8g16310.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.03 Archaeplastida
Pp3c12_20700V3.1 No alias AMP-dependent synthetase and ligase family protein 0.06 Archaeplastida
Zm00001e024608_P001 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e036457_P004 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e040332_P001 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 53 524
No external refs found!