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  5. Solyc01g079930.3.1

Solyc01g079930.3.1


Description : pepsin-type protease


Gene families : OG0000678 (Archaeplastida) Phylogenetic Tree(s): OG0000678_tree ,
OG_05_0000388 (LandPlants) Phylogenetic Tree(s): OG_05_0000388_tree ,
OG_06_0000339 (SeedPlants) Phylogenetic Tree(s): OG_06_0000339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079930.3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00075590 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00025p00079140 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AMTR_s00025p00079520 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AT5G48430 No alias Eukaryotic aspartyl protease family protein 0.04 Archaeplastida
GSVIVT01017895001 No alias Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
Gb_13040 No alias pepsin-type protease 0.03 Archaeplastida
Gb_13050 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os01g71090.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os01g71130.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os05g33400.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os05g33410.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os05g33430.1 No alias pepsin-type protease 0.02 Archaeplastida
MA_483021g0010 No alias pepsin-type protease 0.03 Archaeplastida
MA_4984597g0010 No alias No annotation 0.03 Archaeplastida
MA_498957g0010 No alias pepsin-type protease 0.03 Archaeplastida
MA_919732g0010 No alias pepsin-type protease 0.03 Archaeplastida
Solyc01g079980.3.1 No alias pepsin-type protease 0.04 Archaeplastida
Solyc01g080000.1.1 No alias pepsin-type protease 0.05 Archaeplastida
Solyc08g076620.1.1 No alias pepsin-type protease 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR032861 TAXi_N 39 173
No external refs found!