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  5. Solyc01g080690.3.1

Solyc01g080690.3.1


Description : LEC14B homolog OS=Prunus armeniaca (sp|o24467|le14b_pruar : 613.0)


Gene families : OG0002855 (Archaeplastida) Phylogenetic Tree(s): OG0002855_tree ,
OG_05_0003528 (LandPlants) Phylogenetic Tree(s): OG_05_0003528_tree ,
OG_06_0004454 (SeedPlants) Phylogenetic Tree(s): OG_06_0004454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g080690.3.1
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011041001 No alias LEC14B protein OS=Lithospermum erythrorhizon 0.04 Archaeplastida
LOC_Os05g05210.1 No alias LEC14B protein OS=Lithospermum erythrorhizon... 0.03 Archaeplastida
LOC_Os05g33710.1 No alias LEC14B protein OS=Lithospermum erythrorhizon... 0.04 Archaeplastida
Zm00001e027522_P001 No alias LEC14B homolog OS=Prunus armeniaca... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 290 324
IPR001680 WD40_repeat 418 447
IPR001680 WD40_repeat 365 406
IPR001680 WD40_repeat 203 235
IPR001680 WD40_repeat 246 278
No external refs found!