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  5. AMTR_s00021p00242180

AMTR_s00021p00242180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.255

Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00242180
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00033p00227850 evm_27.TU.AmTr_v1... Probable pectinesterase/pectinesterase inhibitor 21... 0.02 Archaeplastida
AMTR_s00129p00031200 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.08 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Archaeplastida
AT4G00190 PME38, ATPME38 pectin methylesterase 38 0.04 Archaeplastida
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.09 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_01422 No alias pectin methylesterase 0.05 Archaeplastida
Gb_05254 No alias pectin methylesterase 0.03 Archaeplastida
Gb_06356 No alias pectin methylesterase 0.03 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.05 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.05 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.04 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os01g13320.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os01g15039.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g21034.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.07 Archaeplastida
LOC_Os06g09340.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os07g49100.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g36240.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_2017g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_2253g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_54974g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_5681731g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_906551g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9367g0020 No alias pectin methylesterase 0.04 Archaeplastida
Mp8g09330.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c2_35260V3.1 No alias pectin methylesterase 3 0.03 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
Smo83744 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g080220.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc03g083360.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc06g034360.2.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc09g075330.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc11g005770.2.1 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e006791_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e011069_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e014142_P001 No alias pectin methylesterase 0.08 Archaeplastida
Zm00001e017515_P001 No alias pectin methylesterase 0.08 Archaeplastida
Zm00001e022184_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e025576_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e035838_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e041757_P001 No alias pectin methylesterase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
CC GO:0005618 cell wall IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 80 228
IPR000070 Pectinesterase_cat 300 596
No external refs found!