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  5. Solyc01g081070.3.1

Solyc01g081070.3.1


Description : component Sec23 of Sec23/24 cargo adaptor subcomplex


Gene families : OG0001193 (Archaeplastida) Phylogenetic Tree(s): OG0001193_tree ,
OG_05_0001066 (LandPlants) Phylogenetic Tree(s): OG_05_0001066_tree ,
OG_06_0002598 (SeedPlants) Phylogenetic Tree(s): OG_06_0002598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g081070.3.1
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00163370 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
AT3G23660 No alias Sec23/Sec24 protein transport family protein 0.04 Archaeplastida
AT5G43670 No alias Sec23/Sec24 protein transport family protein 0.02 Archaeplastida
Cpa|evm.model.tig00001408.15 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
GSVIVT01026719001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.07 Archaeplastida
GSVIVT01031567001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Gb_05558 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.06 Archaeplastida
LOC_Os08g36994.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
LOC_Os11g24560.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
MA_10427000g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp7g12190.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
Pp3c10_18520V3.1 No alias Sec23/Sec24 protein transport family protein 0.04 Archaeplastida
Pp3c6_940V3.1 No alias Sec23/Sec24 protein transport family protein 0.07 Archaeplastida
Smo107900 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Smo168140 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Zm00001e008888_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
Zm00001e009959_P002 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
Zm00001e012060_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
Zm00001e021415_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.09 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Neighborhood
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR012990 Sec23_24_beta_S 402 507
IPR006896 Sec23/24_trunk_dom 125 391
IPR006895 Znf_Sec23_Sec24 54 93
IPR007123 Gelsolin-like_dom 635 721
IPR006900 Sec23/24_helical_dom 521 619
No external refs found!