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  5. Solyc01g088275.1.1

Solyc01g088275.1.1


Description : Germin-like protein 8-2 OS=Oryza sativa subsp. japonica (sp|q6yza9|gl82_orysj : 134.0)


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0013449 (LandPlants) Phylogenetic Tree(s): OG_05_0013449_tree ,
OG_06_0012548 (SeedPlants) Phylogenetic Tree(s): OG_06_0012548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g088275.1.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241260 evm_27.TU.AmTr_v1... Germin-like protein 3-7 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00067p00014150 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00119480 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00120230 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00121240 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00089p00127600 evm_27.TU.AmTr_v1... Germin-like protein 8-2 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
AMTR_s00110p00020470 evm_27.TU.AmTr_v1... Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00794p00001640 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AT1G18980 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G04150 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G04170 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G04180 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G04190 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G04200 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G05950 No alias RmlC-like cupins superfamily protein 0.05 Archaeplastida
AT5G39160 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
GSVIVT01000061001 No alias No description available 0.04 Archaeplastida
GSVIVT01000062001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000063001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000067001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01000070001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000098001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000101001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000103001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01028220001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
Gb_07519 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_10684 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_17655 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_18427 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_18428 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g14670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os04g52720.1 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g08980.1 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g35760.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10255546g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10345692g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_125605g0010 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_5449g0010 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
MA_740063g0010 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_8404570g0010 No alias Germin-like protein subfamily 3 member 3 OS=Arabidopsis... 0.03 Archaeplastida
MA_90151g0010 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
MA_926447g0010 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp2g01610.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Mp2g01660.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Mp2g24890.1 No alias Germin-like protein subfamily 2 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp5g02540.1 No alias Germin-like protein 3-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g02550.1 No alias Oxalate oxidase 2 OS=Hordeum vulgare... 0.03 Archaeplastida
Mp6g03890.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c23_1340V3.1 No alias germin-like protein 5 0.04 Archaeplastida
Pp3c23_1379V3.1 No alias germin-like protein 5 0.04 Archaeplastida
Pp3c23_1420V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c23_1430V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c23_1480V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c4_3770V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Smo103237 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Smo105500 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo109813 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo89841 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc01g102380.5.1.1 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.03 Archaeplastida
Solyc01g102890.4.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.07 Archaeplastida
Solyc01g102895.1.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g102910.4.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.08 Archaeplastida
Solyc03g113570.1.1 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g006500.4.1 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g006980.1.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e006921_P001 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e013714_P001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e014725_P001 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e025458_P001 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e031079_P001 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 2 127
No external refs found!