Solyc01g090560.4.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g090560.4.1
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00147970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
AMTR_s00021p00223240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
AMTR_s00129p00119770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G22985	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT1G24590	DRN-LIKE, ESR2,...	DORNROSCHEN-like	0.04	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT2G38340	DREB19	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT2G40340	AtERF48, DREB2C	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G11020	DREB2B, DREB2	DRE/CRT-binding protein 2B	0.01	Archaeplastida
AT3G15210	ATERF4, RAP2.5,...	ethylene responsive element binding factor 4	0.02	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.02	Archaeplastida
AT5G25190	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.01	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
GSVIVT01013913001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01016684001	No alias	Ethylene-responsive transcription factor RAP2-12...	0.03	Archaeplastida
GSVIVT01021060001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01031388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01031747001	No alias	Alpha-amylase type B isozyme OS=Hordeum vulgare	0.02	Archaeplastida
GSVIVT01035098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Gb_00745	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_07949	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_08642	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.02	Archaeplastida
Gb_08781	No alias	transcription factor (DREB)	0.01	Archaeplastida
Gb_19320	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_25978	No alias	Ethylene-responsive transcription factor ABI4...	0.01	Archaeplastida
Gb_34286	No alias	transcription factor (DREB)	0.01	Archaeplastida
Gb_34848	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_35015	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_41294	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g54890.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g64790.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g06330.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os02g13710.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os02g32140.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os02g43940.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
LOC_Os02g45450.1	No alias	Dehydration-responsive element-binding protein 1G...	0.03	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os02g54050.1	No alias	Ethylene-responsive transcription factor ERF018...	0.04	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.02	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g57340.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
LOC_Os05g41760.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
LOC_Os08g31580.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
LOC_Os08g41030.1	No alias	no hits & (original description: none)	0.01	Archaeplastida
LOC_Os09g11460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
LOC_Os09g13940.2	No alias	transcription factor (ERF)	0.01	Archaeplastida
LOC_Os10g41130.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os10g41330.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_120531g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_12671g0020	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_162045g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_19420g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_425410g0010	No alias	Ethylene-responsive transcription factor RAP2-13...	0.05	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_66742g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c11_10660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c13_4270V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13260V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c16_17550V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c26_13260V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c3_31490V3.1	No alias	C-repeat-binding factor 4	0.01	Archaeplastida
Pp3c3_31500V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c6_19350V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_20480V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c6_28290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_28370V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
Pp3c7_2300V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g009440.3.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
Solyc03g116610.3.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Solyc03g117230.1.1	No alias	Ethylene-responsive transcription factor ERF084...	0.02	Archaeplastida
Solyc04g054910.4.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc04g072300.1.1	No alias	Ethylene-responsive transcription factor FZP OS=Oryza...	0.01	Archaeplastida
Solyc04g072900.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc04g078640.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g013540.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.08	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc09g075420.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
Solyc11g012980.1.1	No alias	Ethylene-responsive transcription factor ERF012...	0.04	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc12g056590.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e000400_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e004048_P002	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006753_P003	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e013096_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e014008_P002	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e019567_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e021331_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e023149_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e023686_P001	No alias	transcription factor (ERF)	0.12	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e028920_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.01	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e032033_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e032483_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e034242_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e037869_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e038525_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.01	Archaeplastida
Zm00001e041781_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	99	148

External Links

No external refs found!

Solyc01g090560.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation