1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g090600.4.1

Solyc01g090600.4.1


Description : Type III polyketide synthase A OS=Arabidopsis thaliana (sp|o23674|pksa_arath : 497.0) & Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase(50.2.3 : 292.5)


Gene families : OG0005376 (Archaeplastida) Phylogenetic Tree(s): OG0005376_tree ,
OG_05_0003653 (LandPlants) Phylogenetic Tree(s): OG_05_0003653_tree ,
OG_06_0003565 (SeedPlants) Phylogenetic Tree(s): OG_06_0003565_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090600.4.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00033190 evm_27.TU.AmTr_v1... Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.12 Archaeplastida
AMTR_s00182p00053650 evm_27.TU.AmTr_v1... Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.11 Archaeplastida
AT1G02050 LAP6 Chalcone and stilbene synthase family protein 0.18 Archaeplastida
AT4G00040 No alias Chalcone and stilbene synthase family protein 0.03 Archaeplastida
AT4G34850 LAP5 Chalcone and stilbene synthase family protein 0.19 Archaeplastida
GSVIVT01018219001 No alias Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.12 Archaeplastida
GSVIVT01024107001 No alias Type III polyketide synthase B OS=Arabidopsis thaliana 0.1 Archaeplastida
Gb_02579 No alias hydroxyalkyl alpha-pyrone synthase 0.06 Archaeplastida
Gb_29977 No alias hydroxyalkyl alpha-pyrone synthase 0.05 Archaeplastida
LOC_Os07g22850.1 No alias hydroxyalkyl alpha-pyrone synthase 0.13 Archaeplastida
LOC_Os10g34360.1 No alias hydroxyalkyl alpha-pyrone synthase 0.16 Archaeplastida
MA_4931944g0010 No alias Type III polyketide synthase A OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_619670g0010 No alias Type III polyketide synthase B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c2_32960V3.1 No alias Chalcone and stilbene synthase family protein 0.06 Archaeplastida
Smo122361 No alias Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.03 Archaeplastida
Zm00001e004538_P001 No alias hydroxyalkyl alpha-pyrone synthase 0.12 Archaeplastida
Zm00001e012647_P001 No alias hydroxyalkyl alpha-pyrone synthase 0.14 Archaeplastida
Zm00001e033354_P001 No alias hydroxyalkyl alpha-pyrone synthase 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001099 Chalcone/stilbene_synthase_N 66 241
IPR012328 Chalcone/stilbene_synth_C 253 401
No external refs found!