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  5. Solyc01g091370.4.1

Solyc01g091370.4.1


Description : AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana (sp|q8vyj2|ahl1_arath : 186.0)


Gene families : OG0000405 (Archaeplastida) Phylogenetic Tree(s): OG0000405_tree ,
OG_05_0000251 (LandPlants) Phylogenetic Tree(s): OG_05_0000251_tree ,
OG_06_0000180 (SeedPlants) Phylogenetic Tree(s): OG_06_0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g091370.4.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT2G45850 No alias AT hook motif DNA-binding family protein 0.03 Archaeplastida
LOC_Os12g05200.1 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e016260_P002 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e023546_P003 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e037798_P002 No alias AT-hook motif nuclear-localized protein 10... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 115 230
No external refs found!