Solyc01g096860.3.1

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g096860.3.1
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00086450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00066p00028460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G72570	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT5G57390	AIL5, EMK, CHO1	AINTEGUMENTA-like 5	0.04	Archaeplastida
Cre08.g385350	No alias	No description available	0.02	Archaeplastida
GSVIVT01002536001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01023697001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01025307001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01027345001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
Gb_18139	No alias	transcription factor (AP2)	0.04	Archaeplastida
Gb_18560	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_33988	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_36842	No alias	transcription factor (AP2)	0.03	Archaeplastida
Gb_39931	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os06g05340.1	No alias	transcription factor (AP2). RAM1-dependent transcription...	0.04	Archaeplastida
LOC_Os06g43220.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_10005612g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_121578g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_639835g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_95471g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
Mp7g13270.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Pp3c23_13360V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c9_25400V3.1	No alias	AINTEGUMENTA-like 5	0.03	Archaeplastida
Solyc04g049800.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc07g018290.4.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc11g072600.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e009225_P003	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e024044_P002	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e029525_P003	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e034197_P002	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e037501_P005	No alias	transcription factor (AP2)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
CC	GO:0005811	lipid droplet	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
CC	GO:0031011	Ino80 complex	IEP	Neighborhood
CC	GO:0033202	DNA helicase complex	IEP	Neighborhood
CC	GO:0044454	nuclear chromosome part	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	Neighborhood
CC	GO:0097346	INO80-type complex	IEP	Neighborhood
CC	GO:1904949	ATPase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	173	224
IPR001471	AP2/ERF_dom	72	130

External Links

No external refs found!

Solyc01g096860.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation