AMTR_s00022p00063910 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.43

Description : External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.NFR1/LYK3 LysM receptor kinase

Gene families : OG0001523 (Archaeplastida) Phylogenetic Tree(s): OG0001523_tree ,
OG_05_0000985 (LandPlants) Phylogenetic Tree(s): OG_05_0000985_tree ,
OG_06_0001825 (SeedPlants) Phylogenetic Tree(s): OG_06_0001825_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00022p00063910
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AT2G33580	No alias	Protein kinase superfamily protein	0.1	Archaeplastida
GSVIVT01013461001	No alias	Protein modification.phosphorylation.TKL kinase...	0.03	Archaeplastida
GSVIVT01019038001	No alias	External stimuli response.biotic...	0.08	Archaeplastida
Gb_09697	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.04	Archaeplastida
LOC_Os02g09960.1	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.05	Archaeplastida
LOC_Os06g41960.1	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.04	Archaeplastida
LOC_Os06g41980.1	No alias	protein kinase (LysM)	0.04	Archaeplastida
MA_10436842g0010	No alias	LysM domain receptor-like kinase 3 OS=Medicago...	0.02	Archaeplastida
MA_112604g0010	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.03	Archaeplastida
MA_475682g0010	No alias	protein kinase (LysM)	0.03	Archaeplastida
MA_793381g0010	No alias	protein kinase (LysM). LysM receptor kinase (NFR5/NFP)	0.03	Archaeplastida
MA_892990g0010	No alias	protein kinase (LysM). LysM receptor kinase (NFR5/NFP)	0.03	Archaeplastida
MA_9476g0020	No alias	protein kinase (LysM)	0.06	Archaeplastida
MA_97722g0010	No alias	Serine/threonine receptor-like kinase NFP OS=Medicago...	0.02	Archaeplastida
Mp8g11780.1	No alias	protein kinase (LysM)	0.02	Archaeplastida
Pp3c1_6050V3.1	No alias	Protein kinase superfamily protein	0.03	Archaeplastida
Pp3c7_26350V3.1	No alias	protein kinase family protein / peptidoglycan-binding...	0.04	Archaeplastida
Solyc02g089900.1.1	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.1	Archaeplastida
Solyc12g089020.2.1	No alias	protein kinase (LysM)	0.04	Archaeplastida
Zm00001e014106_P001	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.07	Archaeplastida
Zm00001e025053_P001	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
CC	GO:0031012	extracellular matrix	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044421	extracellular region part	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018392	LysM_dom	117	163
IPR000719	Prot_kinase_dom	373	622

External Links

No external refs found!

AMTR_s00022p00063910 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation