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  5. Solyc01g098220.2.1

Solyc01g098220.2.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000938 (Archaeplastida) Phylogenetic Tree(s): OG0000938_tree ,
OG_05_0000559 (LandPlants) Phylogenetic Tree(s): OG_05_0000559_tree ,
OG_06_0000336 (SeedPlants) Phylogenetic Tree(s): OG_06_0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g098220.2.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT2G42430 LBD16, ASL18 lateral organ boundaries-domain 16 0.03 Archaeplastida
AT3G03760 LBD20 LOB domain-containing protein 20 0.08 Archaeplastida
GSVIVT01029979001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
Gb_14010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_39343 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os01g56530.1 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
LOC_Os03g05510.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os03g14270.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Mp8g11560.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc01g091420.2.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e001031_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e003874_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e019686_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e038582_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 37 135
No external refs found!