- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component RPS10 of SSU proteome
Gene families : OG0001849 (Archaeplastida) Phylogenetic Tree(s): OG0001849_tree ,
OG_05_0001692 (LandPlants) Phylogenetic Tree(s): OG_05_0001692_tree ,
OG_06_0002148 (SeedPlants) Phylogenetic Tree(s): OG_06_0002148_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g099670.3.1 | |
| Cluster | HCCA: Cluster_86 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00250710 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.26 | Archaeplastida | |
| AMTR_s00017p00221160 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.14 | Archaeplastida | |
| AT4G25740 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.44 | Archaeplastida | |
| AT5G41520 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.29 | Archaeplastida | |
| AT5G52650 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.47 | Archaeplastida | |
| Cpa|evm.model.tig00001164.5 | No alias | 40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica | 0.28 | Archaeplastida | |
| Cre09.g411100 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.18 | Archaeplastida | |
| GSVIVT01019409001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.25 | Archaeplastida | |
| GSVIVT01028854001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.25 | Archaeplastida | |
| Gb_10517 | No alias | component RPS10 of SSU proteome | 0.17 | Archaeplastida | |
| LOC_Os01g73160.1 | No alias | component RPS10 of SSU proteome | 0.25 | Archaeplastida | |
| LOC_Os04g35090.1 | No alias | component RPS10 of SSU proteome | 0.32 | Archaeplastida | |
| MA_111018g0010 | No alias | component RPS10 of SSU proteome | 0.23 | Archaeplastida | |
| MA_314020g0010 | No alias | component RPS10 of SSU proteome | 0.16 | Archaeplastida | |
| Mp2g00580.1 | No alias | component RPS10 of SSU proteome | 0.4 | Archaeplastida | |
| Pp3c10_21170V3.1 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.17 | Archaeplastida | |
| Pp3c10_990V3.1 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.33 | Archaeplastida | |
| Pp3c14_1810V3.1 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.35 | Archaeplastida | |
| Pp3c1_18400V3.1 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.4 | Archaeplastida | |
| Pp3c23_13100V3.1 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.27 | Archaeplastida | |
| Pp3c24_2340V3.1 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.24 | Archaeplastida | |
| Pp3c2_18620V3.1 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.41 | Archaeplastida | |
| Smo37555 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.25 | Archaeplastida | |
| Zm00001e008107_P001 | No alias | component RPS10 of SSU proteome | 0.34 | Archaeplastida | |
| Zm00001e018554_P001 | No alias | No annotation | 0.29 | Archaeplastida | |
| Zm00001e028280_P001 | No alias | component RPS10 of SSU proteome | 0.34 | Archaeplastida | |
| Zm00001e040881_P001 | No alias | component RPS10 of SSU proteome | 0.35 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0017048 | Rho GTPase binding | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| CC | GO:0031968 | organelle outer membrane | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
| CC | GO:0098805 | whole membrane | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005326 | S10_plectin_N | 3 | 94 |
| No external refs found! |