Coexpression cluster: Cluster_86 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1990904 ribonucleoprotein complex 56.07% (60/107) 5.68 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 55.14% (59/107) 5.67 0.0 0.0
GO:0043229 intracellular organelle 55.14% (59/107) 4.77 0.0 0.0
GO:0043228 non-membrane-bounded organelle 55.14% (59/107) 5.67 0.0 0.0
GO:0043226 organelle 55.14% (59/107) 4.77 0.0 0.0
GO:0043170 macromolecule metabolic process 65.42% (70/107) 3.06 0.0 0.0
GO:0043043 peptide biosynthetic process 57.01% (61/107) 5.8 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 61.68% (66/107) 5.3 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 61.68% (66/107) 4.25 0.0 0.0
GO:0043604 amide biosynthetic process 57.01% (61/107) 5.77 0.0 0.0
GO:0044249 cellular biosynthetic process 61.68% (66/107) 4.56 0.0 0.0
GO:1901576 organic substance biosynthetic process 61.68% (66/107) 4.49 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 57.01% (61/107) 5.16 0.0 0.0
GO:0044464 cell part 56.07% (60/107) 3.77 0.0 0.0
GO:0044444 cytoplasmic part 56.07% (60/107) 4.88 0.0 0.0
GO:0044424 intracellular part 56.07% (60/107) 3.83 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 58.88% (63/107) 4.95 0.0 0.0
GO:0044267 cellular protein metabolic process 57.94% (62/107) 3.57 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 62.62% (67/107) 3.36 0.0 0.0
GO:0032991 protein-containing complex 56.07% (60/107) 4.4 0.0 0.0
GO:0019538 protein metabolic process 57.94% (62/107) 3.27 0.0 0.0
GO:0006518 peptide metabolic process 57.01% (61/107) 5.77 0.0 0.0
GO:0009059 macromolecule biosynthetic process 61.68% (66/107) 5.22 0.0 0.0
GO:0009058 biosynthetic process 61.68% (66/107) 4.35 0.0 0.0
GO:0043603 cellular amide metabolic process 57.01% (61/107) 5.73 0.0 0.0
GO:0005198 structural molecule activity 57.01% (61/107) 5.7 0.0 0.0
GO:0003735 structural constituent of ribosome 57.01% (61/107) 5.81 0.0 0.0
GO:0005840 ribosome 55.14% (59/107) 5.81 0.0 0.0
GO:0006412 translation 57.01% (61/107) 5.82 0.0 0.0
GO:0044237 cellular metabolic process 65.42% (70/107) 2.83 0.0 0.0
GO:0006807 nitrogen compound metabolic process 62.62% (67/107) 2.87 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 57.94% (62/107) 3.05 0.0 0.0
GO:0009987 cellular process 66.36% (71/107) 2.6 0.0 0.0
GO:0071704 organic substance metabolic process 65.42% (70/107) 2.59 0.0 0.0
GO:0044238 primary metabolic process 62.62% (67/107) 2.59 0.0 0.0
GO:0005575 cellular_component 56.07% (60/107) 2.72 0.0 0.0
GO:0008152 metabolic process 65.42% (70/107) 2.1 0.0 0.0
GO:0008150 biological_process 67.29% (72/107) 1.55 0.0 0.0
GO:0003723 RNA binding 15.89% (17/107) 4.2 0.0 0.0
GO:0003674 molecular_function 71.96% (77/107) 1.03 0.0 0.0
GO:0019843 rRNA binding 6.54% (7/107) 6.37 0.0 0.0
GO:0003676 nucleic acid binding 17.76% (19/107) 1.84 1e-06 3e-06
GO:0006414 translational elongation 2.8% (3/107) 6.73 2e-06 7e-06
GO:0003746 translation elongation factor activity 2.8% (3/107) 5.99 1.3e-05 3.6e-05
GO:0008097 5S rRNA binding 1.87% (2/107) 7.31 5.8e-05 0.000156
GO:0008135 translation factor activity, RNA binding 2.8% (3/107) 4.15 0.000665 0.001734
GO:0042254 ribosome biogenesis 1.87% (2/107) 5.61 0.000745 0.001902
GO:0022613 ribonucleoprotein complex biogenesis 1.87% (2/107) 5.51 0.000867 0.002168
GO:0044085 cellular component biogenesis 1.87% (2/107) 5.23 0.001288 0.003155
GO:0009451 RNA modification 1.87% (2/107) 4.31 0.004556 0.010935
GO:0016070 RNA metabolic process 4.67% (5/107) 1.98 0.009154 0.02154
GO:0015934 large ribosomal subunit 0.93% (1/107) 5.99 0.015603 0.035328
GO:0044391 ribosomal subunit 0.93% (1/107) 5.99 0.015603 0.035328
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.108 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.176 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.385 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_167 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.047 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.167 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_218 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.213 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.064 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_210 0.044 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_224 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.344 Archaeplastida Compare
Gingko biloba HCCA Cluster_29 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.223 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.069 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.081 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.089 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.49 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.094 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.419 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_77 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_91 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_115 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.362 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_78 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.17 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.237 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.208 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.051 Archaeplastida Compare
Picea abies HCCA Cluster_90 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_181 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_187 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_199 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.243 Archaeplastida Compare
Picea abies HCCA Cluster_239 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.101 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.038 Archaeplastida Compare
Picea abies HCCA Cluster_406 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_41 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.391 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_300 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_318 0.031 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.116 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.062 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.129 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.042 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_166 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.125 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.077 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.139 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.086 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_265 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_284 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.219 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.118 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.259 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.042 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.064 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.273 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.195 Archaeplastida Compare
Sequences (107) (download table)

InterPro Domains

GO Terms

Family Terms