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Description : component RPL18 of LSU proteome component
Gene families : OG0001941 (Archaeplastida) Phylogenetic Tree(s): OG0001941_tree ,
OG_05_0001876 (LandPlants) Phylogenetic Tree(s): OG_05_0001876_tree ,
OG_06_0001935 (SeedPlants) Phylogenetic Tree(s): OG_06_0001935_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g099900.4.1 | |
| Cluster | HCCA: Cluster_251 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G05590 | RPL18 | ribosomal protein L18 | 0.35 | Archaeplastida | |
| Cpa|evm.model.tig00000142.18 | No alias | 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum | 0.38 | Archaeplastida | |
| Cre12.g512600 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.36 | Archaeplastida | |
| GSVIVT01028036001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.28 | Archaeplastida | |
| GSVIVT01031168001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.26 | Archaeplastida | |
| GSVIVT01035120001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.22 | Archaeplastida | |
| Gb_16720 | No alias | component RPL18 of LSU proteome component | 0.03 | Archaeplastida | |
| Gb_21301 | No alias | component RPL18 of LSU proteome component | 0.12 | Archaeplastida | |
| LOC_Os03g22180.1 | No alias | component RPL18 of LSU proteome component | 0.38 | Archaeplastida | |
| LOC_Os05g06310.1 | No alias | component RPL18 of LSU proteome component | 0.42 | Archaeplastida | |
| LOC_Os07g47780.1 | No alias | component RPL18 of LSU proteome component | 0.41 | Archaeplastida | |
| MA_36125g0010 | No alias | 60S ribosomal protein L18-3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| MA_3674g0020 | No alias | 60S ribosomal protein L18-3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_5630845g0010 | No alias | no hits & (original description: none) | 0.28 | Archaeplastida | |
| Mp1g22500.1 | No alias | component RPL18 of LSU proteome component | 0.48 | Archaeplastida | |
| Pp3c1_3480V3.1 | No alias | ribosomal protein L18 | 0.42 | Archaeplastida | |
| Pp3c1_5330V3.1 | No alias | ribosomal protein L18 | 0.33 | Archaeplastida | |
| Pp3c2_32510V3.1 | No alias | ribosomal protein L18 | 0.43 | Archaeplastida | |
| Pp3c2_34080V3.1 | No alias | ribosomal protein L18 | 0.34 | Archaeplastida | |
| Pp3c7_22030V3.1 | No alias | ribosomal protein L18 | 0.24 | Archaeplastida | |
| Smo267976 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.24 | Archaeplastida | |
| Zm00001e026750_P001 | No alias | component RPL18 of LSU proteome component | 0.41 | Archaeplastida | |
| Zm00001e031155_P001 | No alias | component RPL18 of LSU proteome component | 0.31 | Archaeplastida | |
| Zm00001e035836_P001 | No alias | component RPL18 of LSU proteome component | 0.34 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| MF | GO:0017048 | Rho GTPase binding | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| CC | GO:0031968 | organelle outer membrane | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
| CC | GO:0098805 | whole membrane | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021131 | Ribosomal_L18e/L15P | 2 | 186 |
| No external refs found! |