Coexpression cluster: Cluster_251 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1990904 ribonucleoprotein complex 18.03% (11/61) 4.04 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 18.03% (11/61) 4.06 0.0 0.0
GO:0043228 non-membrane-bounded organelle 18.03% (11/61) 4.06 0.0 0.0
GO:0005840 ribosome 18.03% (11/61) 4.2 0.0 0.0
GO:0006518 peptide metabolic process 16.39% (10/61) 3.97 0.0 0.0
GO:0043043 peptide biosynthetic process 16.39% (10/61) 4.0 0.0 0.0
GO:0043604 amide biosynthetic process 16.39% (10/61) 3.98 0.0 0.0
GO:0003735 structural constituent of ribosome 16.39% (10/61) 4.01 0.0 0.0
GO:0043603 cellular amide metabolic process 16.39% (10/61) 3.93 0.0 0.0
GO:0006412 translation 16.39% (10/61) 4.02 0.0 0.0
GO:0005198 structural molecule activity 16.39% (10/61) 3.9 0.0 0.0
GO:0044444 cytoplasmic part 19.67% (12/61) 3.37 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 16.39% (10/61) 3.39 0.0 0.0
GO:0043226 organelle 18.03% (11/61) 3.16 0.0 0.0
GO:0043229 intracellular organelle 18.03% (11/61) 3.16 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 16.39% (10/61) 3.37 0.0 0.0
GO:0009059 macromolecule biosynthetic process 16.39% (10/61) 3.31 0.0 1e-06
GO:0044271 cellular nitrogen compound biosynthetic process 16.39% (10/61) 3.11 0.0 2e-06
GO:0034641 cellular nitrogen compound metabolic process 19.67% (12/61) 2.6 1e-06 5e-06
GO:0032991 protein-containing complex 18.03% (11/61) 2.76 1e-06 5e-06
GO:0044249 cellular biosynthetic process 16.39% (10/61) 2.65 4e-06 3.3e-05
GO:0044424 intracellular part 19.67% (12/61) 2.32 4e-06 3.3e-05
GO:0044464 cell part 19.67% (12/61) 2.26 6e-06 4.4e-05
GO:1901576 organic substance biosynthetic process 16.39% (10/61) 2.58 6e-06 4.6e-05
GO:0009058 biosynthetic process 16.39% (10/61) 2.44 1.3e-05 9.7e-05
GO:0044267 cellular protein metabolic process 19.67% (12/61) 2.01 3.3e-05 0.000228
GO:0044260 cellular macromolecule metabolic process 21.31% (13/61) 1.8 6.5e-05 0.000436
GO:0006807 nitrogen compound metabolic process 24.59% (15/61) 1.52 0.000146 0.000944
GO:0003723 RNA binding 8.2% (5/61) 3.25 0.000185 0.001156
GO:0003697 single-stranded DNA binding 3.28% (2/61) 6.54 0.000206 0.001241
GO:0043170 macromolecule metabolic process 22.95% (14/61) 1.55 0.000214 0.00125
GO:0019538 protein metabolic process 19.67% (12/61) 1.72 0.00023 0.001302
GO:1901564 organonitrogen compound metabolic process 21.31% (13/61) 1.6 0.000262 0.001436
GO:0008173 RNA methyltransferase activity 3.28% (2/61) 6.22 0.000326 0.001686
GO:0044237 cellular metabolic process 24.59% (15/61) 1.42 0.000321 0.001709
GO:0019843 rRNA binding 3.28% (2/61) 5.37 0.001075 0.005405
GO:0044238 primary metabolic process 24.59% (15/61) 1.24 0.001211 0.005924
GO:0071704 organic substance metabolic process 24.59% (15/61) 1.18 0.001822 0.00733
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.28% (2/61) 5.0 0.001806 0.007428
GO:0000154 rRNA modification 1.64% (1/61) 9.13 0.00179 0.007535
GO:0036265 RNA (guanine-N7)-methylation 1.64% (1/61) 9.13 0.00179 0.007535
GO:0070476 rRNA (guanine-N7)-methylation 1.64% (1/61) 9.13 0.00179 0.007535
GO:0070475 rRNA base methylation 1.64% (1/61) 9.13 0.00179 0.007535
GO:0016435 rRNA (guanine) methyltransferase activity 1.64% (1/61) 9.13 0.00179 0.007535
GO:0031167 rRNA methylation 1.64% (1/61) 9.13 0.00179 0.007535
GO:0009987 cellular process 24.59% (15/61) 1.17 0.001964 0.007729
GO:0140102 catalytic activity, acting on a rRNA 1.64% (1/61) 8.13 0.003577 0.013489
GO:0008649 rRNA methyltransferase activity 1.64% (1/61) 8.13 0.003577 0.013489
GO:0005575 cellular_component 19.67% (12/61) 1.21 0.004758 0.017576
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity 1.64% (1/61) 7.54 0.005361 0.018661
GO:0016597 amino acid binding 1.64% (1/61) 7.54 0.005361 0.018661
GO:0016743 carboxyl- or carbamoyltransferase activity 1.64% (1/61) 7.54 0.005361 0.018661
GO:0006606 protein import into nucleus 1.64% (1/61) 7.13 0.007142 0.022678
GO:0051170 import into nucleus 1.64% (1/61) 7.13 0.007142 0.022678
GO:0061608 nuclear import signal receptor activity 1.64% (1/61) 7.13 0.007142 0.022678
GO:0034504 protein localization to nucleus 1.64% (1/61) 7.13 0.007142 0.022678
GO:0008097 5S rRNA binding 1.64% (1/61) 7.13 0.007142 0.022678
GO:0016741 transferase activity, transferring one-carbon groups 4.92% (3/61) 2.87 0.008095 0.025263
GO:0031406 carboxylic acid binding 1.64% (1/61) 6.8 0.008919 0.026039
GO:0043177 organic acid binding 1.64% (1/61) 6.8 0.008919 0.026039
GO:0001510 RNA methylation 1.64% (1/61) 6.8 0.008919 0.026039
GO:0140142 nucleocytoplasmic carrier activity 1.64% (1/61) 6.8 0.008919 0.026039
GO:0003674 molecular_function 50.82% (31/61) 0.52 0.009225 0.026502
GO:0034470 ncRNA processing 3.28% (2/61) 3.77 0.009549 0.027006
GO:0003676 nucleic acid binding 13.11% (8/61) 1.4 0.010165 0.028306
GO:0016423 tRNA (guanine) methyltransferase activity 1.64% (1/61) 6.54 0.010694 0.028889
GO:0008175 tRNA methyltransferase activity 1.64% (1/61) 6.54 0.010694 0.028889
GO:0140104 molecular carrier activity 1.64% (1/61) 6.32 0.012465 0.033179
GO:0005488 binding 32.79% (20/61) 0.71 0.013562 0.035577
GO:0017038 protein import 1.64% (1/61) 5.96 0.015998 0.041368
GO:0031968 organelle outer membrane 1.64% (1/61) 5.67 0.019519 0.048397
GO:0005741 mitochondrial outer membrane 1.64% (1/61) 5.67 0.019519 0.048397
GO:0098805 whole membrane 1.64% (1/61) 5.67 0.019519 0.048397
GO:0034660 ncRNA metabolic process 3.28% (2/61) 3.19 0.020276 0.049594
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.07 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.056 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.062 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.12 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.059 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.053 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_228 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.06 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_234 0.029 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.068 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_131 0.029 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_153 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_175 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.038 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_184 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.059 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.038 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.135 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_328 0.044 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.051 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.116 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.054 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.086 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.061 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.098 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.08 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.058 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_298 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.058 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.101 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.044 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_341 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_454 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_486 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.067 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.109 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_69 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.066 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.035 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.086 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.051 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.114 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.069 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.095 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.065 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.066 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_146 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_166 0.02 Archaeplastida Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms