1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00022p00089900

AMTR_s00022p00089900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.71

No description available


Gene families : OG0000575 (Archaeplastida) Phylogenetic Tree(s): OG0000575_tree ,
OG_05_0000284 (LandPlants) Phylogenetic Tree(s): OG_05_0000284_tree ,
OG_06_0000267 (SeedPlants) Phylogenetic Tree(s): OG_06_0000267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00089900
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264290 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00032p00075540 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G56150 No alias SAUR-like auxin-responsive protein family 0.01 Archaeplastida
AT5G42410 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
Gb_38676 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g56240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g45950.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g45970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_40406g0010 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc07g045060.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037766_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037770_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041661_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003676 SAUR_fam 18 84
No external refs found!