Solyc01g103710.4.1

Description : scaffold protein NFU of plastidial SUF system transfer phase

Gene families : OG0003107 (Archaeplastida) Phylogenetic Tree(s): OG0003107_tree ,
OG_05_0002979 (LandPlants) Phylogenetic Tree(s): OG_05_0002979_tree ,
OG_06_0003179 (SeedPlants) Phylogenetic Tree(s): OG_06_0003179_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g103710.4.1
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01023274001	No alias	Coenzyme metabolism.iron-sulfur cluster assembly...	0.06	Archaeplastida
LOC_Os11g07916.1	No alias	scaffold protein NFU of plastidial SUF system transfer phase	0.04	Archaeplastida
MA_10436193g0010	No alias	scaffold protein NFU of plastidial SUF system transfer phase	0.02	Archaeplastida
Mp1g13370.1	No alias	scaffold protein NFU of plastidial SUF system transfer phase	0.03	Archaeplastida
Pp3c14_19650V3.1	No alias	NIFU-like protein 2	0.02	Archaeplastida
Zm00001e024544_P001	No alias	scaffold protein NFU of plastidial SUF system transfer phase	0.05	Archaeplastida
Zm00001e030263_P002	No alias	scaffold protein NFU of plastidial SUF system transfer phase	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	Interproscan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	IEA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
BP	GO:0051186	cofactor metabolic process	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	IEA	Interproscan
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
BP	GO:0017004	cytochrome complex assembly	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001075	NIF_FeS_clus_asmbl_NifU_C	187	249
IPR001075	NIF_FeS_clus_asmbl_NifU_C	106	171

External Links

No external refs found!