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  5. Solyc01g106605.1.1

Solyc01g106605.1.1


Description : Pathogenesis-related protein 1A1 OS=Solanum lycopersicum (sp|q08697|pr1a_sollc : 337.0)


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0000073 (SeedPlants) Phylogenetic Tree(s): OG_06_0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g106605.1.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263770 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.07 Archaeplastida
AMTR_s00012p00263950 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 Archaeplastida
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 Archaeplastida
AT1G50050 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT2G14610 ATPR1, PR1, PR 1 pathogenesis-related gene 1 0.07 Archaeplastida
AT2G19970 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 Archaeplastida
AT4G07820 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 Archaeplastida
AT4G25780 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 Archaeplastida
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT5G57625 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
GSVIVT01036997001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.05 Archaeplastida
Gb_20954 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.05 Archaeplastida
Gb_20955 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.05 Archaeplastida
LOC_Os01g28450.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
LOC_Os07g03580.1 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.04 Archaeplastida
LOC_Os07g03600.1 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.02 Archaeplastida
LOC_Os10g11500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
LOC_Os12g43700.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_10428480g0010 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
MA_150049g0010 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
MA_245441g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 Archaeplastida
MA_85698g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_907632g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
MA_96764g0010 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 146.0) 0.03 Archaeplastida
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 Archaeplastida
Mp5g12510.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.04 Archaeplastida
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.02 Archaeplastida
Mp6g06420.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.07 Archaeplastida
Mp7g06810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c18_21090V3.1 No alias pathogenesis-related gene 1 0.05 Archaeplastida
Smo101024 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare 0.03 Archaeplastida
Smo112379 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.02 Archaeplastida
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
Solyc02g065470.1.1 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.04 Archaeplastida
Solyc07g006710.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e002028_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida
Zm00001e016075_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
Zm00001e023732_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
Zm00001e032757_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 29 146
No external refs found!