1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00022p00139230

AMTR_s00022p00139230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.132

No description available


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000388 (SeedPlants) Phylogenetic Tree(s): OG_06_0000388_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00139230
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.03 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.03 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.02 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01037897001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
Gb_16852 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g05490.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g41110.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os04g08600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os05g14130.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g01180.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_110160g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_5999529g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c5_6880V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Solyc01g005130.2.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc01g107430.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc05g009380.4.1 No alias Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g049870.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003962_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e005916_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e017009_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e025746_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
MF GO:0030410 nicotianamine synthase activity IEP Neighborhood
BP GO:0030417 nicotianamine metabolic process IEP Neighborhood
BP GO:0030418 nicotianamine biosynthetic process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!