1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g108600.3.1

Solyc01g108600.3.1


Description : targeting peptid degrading peptidase (PreP)


Gene families : OG0002837 (Archaeplastida) Phylogenetic Tree(s): OG0002837_tree ,
OG_05_0004802 (LandPlants) Phylogenetic Tree(s): OG_05_0004802_tree ,
OG_06_0007405 (SeedPlants) Phylogenetic Tree(s): OG_06_0007405_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g108600.3.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00013900 evm_27.TU.AmTr_v1... Protein modification.peptide... 0.07 Archaeplastida
AT1G49630 ATPREP2, PREP2 presequence protease 2 0.03 Archaeplastida
Cpa|evm.model.tig00001085.20 No alias Presequence protease 1, chloroplastic/mitochondrial... 0.03 Archaeplastida
Cpa|evm.model.tig00001085.21 No alias Presequence protease 1, chloroplastic/mitochondrial... 0.03 Archaeplastida
Cre01.g020918 No alias Protein modification.peptide... 0.02 Archaeplastida
GSVIVT01031766001 No alias Protein modification.peptide... 0.06 Archaeplastida
Gb_04858 No alias targeting peptid degrading peptidase (PreP) 0.03 Archaeplastida
Gb_04859 No alias Presequence protease 1, chloroplastic/mitochondrial... 0.05 Archaeplastida
LOC_Os02g52390.1 No alias targeting peptid degrading peptidase (PreP) 0.05 Archaeplastida
MA_10436583g0010 No alias targeting peptid degrading peptidase (PreP) 0.08 Archaeplastida
MA_10436583g0020 No alias Presequence protease 2, chloroplastic/mitochondrial... 0.06 Archaeplastida
MA_26953g0010 No alias targeting peptid degrading peptidase (PreP) 0.03 Archaeplastida
MA_502125g0010 No alias targeting peptid degrading peptidase (PreP) 0.08 Archaeplastida
MA_70588g0010 No alias Presequence protease 1, chloroplastic/mitochondrial... 0.06 Archaeplastida
Mp4g12970.1 No alias targeting peptid degrading peptidase (PreP) 0.06 Archaeplastida
Mp4g13030.1 No alias targeting peptid degrading peptidase (PreP) 0.03 Archaeplastida
Pp3c5_3160V3.1 No alias presequence protease 1 0.03 Archaeplastida
Zm00001e015926_P001 No alias targeting peptid degrading peptidase (PreP) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011765 Pept_M16_N 146 223
IPR007863 Peptidase_M16_C 293 480
IPR013578 Peptidase_M16C_assoc 558 807
No external refs found!