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  4. Sequence
  5. Solyc01g109250.2.1

Solyc01g109250.2.1


Description : no hits & (original description: none)


Gene families : OG0000750 (Archaeplastida) Phylogenetic Tree(s): OG0000750_tree ,
OG_05_0000441 (LandPlants) Phylogenetic Tree(s): OG_05_0000441_tree ,
OG_06_0000262 (SeedPlants) Phylogenetic Tree(s): OG_06_0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g109250.2.1
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00043220 evm_27.TU.AmTr_v1... No description available 0.08 Archaeplastida
AT1G76600 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 Archaeplastida
AT2G23690 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
AT3G50800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 Archaeplastida
AT5G66580 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
GSVIVT01003763001 No alias No description available 0.02 Archaeplastida
GSVIVT01013456001 No alias No description available 0.07 Archaeplastida
Gb_01099 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_29302 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g09970.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g09980.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g09990.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os03g52940.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g41940.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10165933g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10427270g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_112931g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_13068g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_4968862g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_59045g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_82882g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_87298g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005612_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e030501_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e037548_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 15 112
No external refs found!