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  5. Solyc01g109360.3.1

Solyc01g109360.3.1


Description : tyrosine-tRNA ligase


Gene families : OG0003004 (Archaeplastida) Phylogenetic Tree(s): OG0003004_tree ,
OG_05_0003971 (LandPlants) Phylogenetic Tree(s): OG_05_0003971_tree ,
OG_06_0004453 (SeedPlants) Phylogenetic Tree(s): OG_06_0004453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g109360.3.1
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001371.16 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Cre03.g145727 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
LOC_Os08g23110.1 No alias tyrosine-tRNA ligase 0.04 Archaeplastida
Mp2g12140.1 No alias tyrosine-tRNA ligase 0.02 Archaeplastida
Pp3c6_19930V3.1 No alias Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial 0.03 Archaeplastida
Zm00001e040262_P002 No alias tyrosine-tRNA ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 73 367
No external refs found!