Coexpression cluster: Cluster_277 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016874 ligase activity 7.69% (4/52) 4.86 1.1e-05 0.002102
GO:0016877 ligase activity, forming carbon-sulfur bonds 3.85% (2/52) 6.9 0.000125 0.007803
GO:0008641 ubiquitin-like modifier activating enzyme activity 3.85% (2/52) 6.9 0.000125 0.007803
GO:0006399 tRNA metabolic process 5.77% (3/52) 4.34 0.000447 0.020991
GO:0043038 amino acid activation 3.85% (2/52) 5.03 0.001717 0.024826
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.85% (2/52) 5.03 0.001717 0.024826
GO:0043039 tRNA aminoacylation 3.85% (2/52) 5.03 0.001717 0.024826
GO:0004812 aminoacyl-tRNA ligase activity 3.85% (2/52) 5.03 0.001717 0.024826
GO:0034660 ncRNA metabolic process 5.77% (3/52) 4.01 0.000871 0.02728
GO:0061025 membrane fusion 1.92% (1/52) 8.36 0.00305 0.027303
GO:0048280 vesicle fusion with Golgi apparatus 1.92% (1/52) 8.36 0.00305 0.027303
GO:0016050 vesicle organization 1.92% (1/52) 8.36 0.00305 0.027303
GO:0006906 vesicle fusion 1.92% (1/52) 8.36 0.00305 0.027303
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine 1.92% (1/52) 8.36 0.00305 0.027303
GO:0090174 organelle membrane fusion 1.92% (1/52) 8.36 0.00305 0.027303
GO:0000278 mitotic cell cycle 1.92% (1/52) 8.36 0.00305 0.027303
GO:0048284 organelle fusion 1.92% (1/52) 8.36 0.00305 0.027303
GO:0016070 RNA metabolic process 7.69% (4/52) 2.69 0.003395 0.027749
GO:0009987 cellular process 25.0% (13/52) 1.19 0.003277 0.028003
GO:0006520 cellular amino acid metabolic process 5.77% (3/52) 4.08 0.000752 0.028285
GO:0006807 nitrogen compound metabolic process 21.15% (11/52) 1.31 0.00394 0.030864
GO:0045116 protein neddylation 1.92% (1/52) 9.36 0.001526 0.031877
GO:0019781 NEDD8 activating enzyme activity 1.92% (1/52) 9.36 0.001526 0.031877
GO:0007049 cell cycle 1.92% (1/52) 7.77 0.004571 0.034376
GO:0140101 catalytic activity, acting on a tRNA 3.85% (2/52) 4.27 0.004879 0.035277
GO:0052803 imidazole-containing compound metabolic process 1.92% (1/52) 7.03 0.007607 0.035755
GO:0098687 chromosomal region 1.92% (1/52) 7.03 0.007607 0.035755
GO:0006547 histidine metabolic process 1.92% (1/52) 7.03 0.007607 0.035755
GO:0019239 deaminase activity 1.92% (1/52) 7.03 0.007607 0.035755
GO:0000105 histidine biosynthetic process 1.92% (1/52) 7.03 0.007607 0.035755
GO:0044237 cellular metabolic process 21.15% (11/52) 1.2 0.006762 0.03632
GO:0006082 organic acid metabolic process 5.77% (3/52) 2.97 0.00669 0.036992
GO:0019752 carboxylic acid metabolic process 5.77% (3/52) 2.98 0.006617 0.037698
GO:0043436 oxoacid metabolic process 5.77% (3/52) 2.98 0.006617 0.037698
GO:0090304 nucleic acid metabolic process 7.69% (4/52) 2.33 0.008251 0.037835
GO:0006725 cellular aromatic compound metabolic process 9.62% (5/52) 2.12 0.00577 0.038739
GO:0046483 heterocycle metabolic process 9.62% (5/52) 2.13 0.005581 0.038861
GO:0043170 macromolecule metabolic process 19.23% (10/52) 1.29 0.006497 0.0394
GO:0006418 tRNA aminoacylation for protein translation 3.85% (2/52) 5.15 0.00147 0.039482
GO:0000775 chromosome, centromeric region 1.92% (1/52) 7.36 0.00609 0.039483
GO:1901360 organic cyclic compound metabolic process 9.62% (5/52) 2.08 0.006431 0.040298
GO:1901564 organonitrogen compound metabolic process 17.31% (9/52) 1.3 0.009548 0.042737
GO:0000139 Golgi membrane 1.92% (1/52) 6.55 0.010634 0.046495
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_162 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_179 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_213 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_245 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_108 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_133 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_41 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_136 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_149 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_181 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_79 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_285 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_304 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_313 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_339 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_179 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_203 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_40 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_198 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_217 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_363 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_435 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_482 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_168 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_360 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_99 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_218 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_148 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_191 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_222 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_155 0.029 Archaeplastida Compare
Sequences (52) (download table)

InterPro Domains

GO Terms

Family Terms