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  5. Solyc01g111520.3.1

Solyc01g111520.3.1


Description : endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c)


Gene families : OG0000244 (Archaeplastida) Phylogenetic Tree(s): OG0000244_tree ,
OG_05_0001409 (LandPlants) Phylogenetic Tree(s): OG_05_0001409_tree ,
OG_06_0001269 (SeedPlants) Phylogenetic Tree(s): OG_06_0001269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g111520.3.1

Target Alias Description ECC score Gene Family Method Actions
Cre01.g044600 No alias Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre01.g044650 No alias Synaptotagmin-2 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre12.g559450 No alias No description available 0.01 Archaeplastida
LOC_Os02g25060.1 No alias endoplasmic reticulum-plasma membrane tethering protein... 0.03 Archaeplastida
Pp3c24_10990V3.1 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 Archaeplastida
Pp3c24_11156V3.1 No alias synaptotagmin A 0.06 Archaeplastida
Solyc09g007860.4.1 No alias endoplasmic reticulum-plasma membrane tethering protein... 0.04 Archaeplastida
Zm00001e010253_P001 No alias endoplasmic reticulum-plasma membrane tethering protein... 0.05 Archaeplastida
Zm00001e033349_P001 No alias Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR000008 C2_dom 419 521
IPR000008 C2_dom 260 361
IPR039010 Synaptotagmin_SMP 67 247
No external refs found!