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  5. Solyc01g111960.3.1

Solyc01g111960.3.1


Description : GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana (sp|q9fia1|gdl87_arath : 223.0)


Gene families : OG0000013 (Archaeplastida) Phylogenetic Tree(s): OG0000013_tree ,
OG_05_0002410 (LandPlants) Phylogenetic Tree(s): OG_05_0002410_tree ,
OG_06_0001589 (SeedPlants) Phylogenetic Tree(s): OG_06_0001589_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g111960.3.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270970 evm_27.TU.AmTr_v1... GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00136p00069360 evm_27.TU.AmTr_v1... GDSL esterase/lipase APG OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G29660 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Archaeplastida
AT1G74460 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT1G75880 No alias SGNH hydrolase-type esterase superfamily protein 0.04 Archaeplastida
AT1G75900 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.06 Archaeplastida
AT2G42990 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT4G18970 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT5G37690 No alias SGNH hydrolase-type esterase superfamily protein 0.03 Archaeplastida
GSVIVT01000246001 No alias GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01016950001 No alias GDSL esterase/lipase APG OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01018115001 No alias GDSL esterase/lipase 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01021305001 No alias GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01036525001 No alias GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_31208 No alias GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g50000.1 No alias GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g05630.1 No alias GDSL esterase/lipase APG OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g14630.1 No alias GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g47210.1 No alias GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g36880.1 No alias GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g30290.1 No alias GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10425922g0010 No alias GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10427890g0010 No alias GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10429829g0010 No alias GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_166543g0010 No alias GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_201164g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_69455g0010 No alias GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_88684g0010 No alias GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g06380.1 No alias GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g04220.1 No alias cutin synthase (CD) 0.03 Archaeplastida
Mp8g03750.1 No alias cutin synthase (CD) 0.02 Archaeplastida
Pp3c12_25610V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
Pp3c14_19530V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
Pp3c16_6900V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
Pp3c25_1227V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
Pp3c26_3320V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Archaeplastida
Solyc03g005900.4.1 No alias GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc04g081755.2.1 No alias GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc07g064720.3.1 No alias GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc11g006250.2.1 No alias cutin synthase (CD) 0.05 Archaeplastida
Solyc11g032050.2.1 No alias GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e019915_P001 No alias GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e035980_P001 No alias GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 35 342
No external refs found!