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  4. Sequence
  5. Solyc01g150101.1.1

Solyc01g150101.1.1


Description : no hits & (original description: none)


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0012218 (SeedPlants) Phylogenetic Tree(s): OG_06_0012218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g150101.1.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00103240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00029p00092220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00043p00225670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
AMTR_s00167p00019840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AT1G27660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.1 Archaeplastida
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT3G20640 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G29100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01005301001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01014542001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01038142001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_06063 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_26693 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_40387 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os02g17680.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os04g41570.2 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os05g14010.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os05g42180.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
LOC_Os07g28890.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os08g08160.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_504223g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp2g19970.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Smo117274 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Smo28262 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc03g031450.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc07g020960.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc10g006640.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e007719_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e010350_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e012002_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e016395_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e019609_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e021661_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e027157_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e031298_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e039938_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!