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  5. Solyc02g021140.3.1

Solyc02g021140.3.1


Description : iron superoxide dismutase. PAP4/FSD3 cofactor of plastid-encoded RNA polymerase


Gene families : OG0002591 (Archaeplastida) Phylogenetic Tree(s): OG0002591_tree ,
OG_05_0002051 (LandPlants) Phylogenetic Tree(s): OG_05_0002051_tree ,
OG_06_0002085 (SeedPlants) Phylogenetic Tree(s): OG_06_0002085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g021140.3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00032580 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 Archaeplastida
AT5G23310 FSD3 Fe superoxide dismutase 3 0.09 Archaeplastida
AT5G51100 FSD2 Fe superoxide dismutase 2 0.09 Archaeplastida
Cre10.g436050 No alias Redox homeostasis.enzymatic reactive oxygen species... 0.02 Archaeplastida
GSVIVT01013850001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.1 Archaeplastida
GSVIVT01026137001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.07 Archaeplastida
Gb_28365 No alias iron superoxide dismutase. PAP4/FSD3 cofactor of... 0.09 Archaeplastida
Mp7g14090.1 No alias iron superoxide dismutase 0.04 Archaeplastida
Pp3c2_27440V3.1 No alias Fe superoxide dismutase 3 0.07 Archaeplastida
Pp3c7_19790V3.1 No alias Fe superoxide dismutase 2 0.02 Archaeplastida
Smo91586 No alias Redox homeostasis.enzymatic reactive oxygen species... 0.04 Archaeplastida
Zm00001e036663_P001 No alias iron superoxide dismutase 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
CC GO:0009349 riboflavin synthase complex IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 39 124
IPR019832 Mn/Fe_SOD_C 135 231
No external refs found!